VCU Bioinformatics and Bioengineering Summer Institute
Virginia Commonwealth University
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Research Simulation
Prediction of protein structure
through molecular modeling
(July 8 - July 13 )

Time: Fri-Tue, July 9 - July 13, 9:00 am - noon
Place: Biotech Park I (medical campus) Suite 212
Organizers: Glen Kellogg and Jason Rife
Audience: Primarily 1st year students

Schedule
Thu July 8, 12pm
Glen Kellogg (VCU, Dept. of Medicinal Chemistry)
Life, the Universe and Everything: Computational Modeling of Biomolecular Interactions
Fri July 9, 9am Molecular Modeling
Mon July 12, 9am Computational titration analysis of a multiprotic HIV-1 protease ligand complex
Tues July 13, 9am Computational titration analysis... (cont)

Austin Hess (BBSI 2004/05) presents: Fornabaio M et al (2003). Simple, intuitive calculations of free energy of binding for protein-ligand complexes. 2. Computational titration and pH effects in molecular models of neuraminidase-inhibitor complexes J Med Chem 46:4487-4500.

Nathan Smith (BBSI 2004/05) presents: Pastor M (1997). A strategy for the incorporation of water molecules present in a ligand binding site into a three-dimensional quantitative structure--activity relationship analysis. J Med Chem 40:4089-4102.

More research simulations        More course web pages