VCU Bioinformatics and Bioengineering Summer Institute
Virginia Commonwealth University
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Research Simulation
Microarrays and gene expression profiles
(July 19 - July 20)

Time: Wed-Thu, July 19 - July 20, 9:00 am - 11:30 am
Place: Bioinformatics Computer Core Lab (Rm 104), Life Sciences Bldg
Organizers: Michael Miles
Audience: Primarily 1st year students

Schedule
Wed July 19, 9am
DNA Microarrays: fundamentals and applications
Presentation: Introduction to DNA Microarrays
Problem Set: (Word Doc) (PDF file)
Data Set: (Excel file)
Thu July 20, 9am Bioinformatic strategies for analysis of DNA microarray data
Presentation: Tertiary Analysis: Connecting Function with Expression Patterns
Problem Set: (Word Doc)
Data Set: (Chromosome 3)
Data Set: (Chromosome 7)
Data Set: (Chromosome 17)
Data Set: (Chromosome 19)

Carrie Oleszkowicz presents:
McClung C.A. and Nestler E.J. (2003).
Regulation of gene expression and cocaine reward by CREB and delta-FosB.
Nature Neuroscience 6(11): 1208-1215

Bogdan Mihai presents:
Tusher VG, Tibshirani R, Chu G (2001).
Significance analysis of microarrays applied to the ionizing radiation response
Proc Natl Acad Sci USA 98:5116-5121

More research simulations        More course web pages