Time: Thu-Fri, July 15 - July 16, 9:00 am - noon
Place: Bioinformatics Computer Core Lab (Rm 104), Life Sciences Bldg
Organizers: Rita Shiang
Audience: Primarily 1st year students

Schedule

Thu July 15, 9am	Genome Annotation Presentation Data/results: Sequence     Predicted proteins         BlastN results     BlastN results summary CJ Williamson (BBSI 2005/06) presents: Donzelli PS, Spilker RL, Ateshian GA, Mow VC (1999). Contact analysis of biphasic transversely isotropic cartilage layers and correlations with tissue failure. J Biomechanics 32:1037-1047
Fri July 16, 9am	Markov models to identify genes from spurious open reading frames Notes Training sets: text#1  text#2   text#3   text#4 Programs: Hamlet     Background-model                   Score-per-model Patrick Koske-McBride (BBSI 2005/06) presents: Nóbrega MA, Zhu Y, Plajzer-Frick I, Afzal V, Rubin EM (2004). Megabase deletions of gene deserts result in viable mice. Nature 431:988-993
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