VCU Bioinformatics and Bioengineering Summer Institute
Virginia Commonwealth University
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Research Simulation
Gene expression profiles
Wednesday, July 23, 2003

Cellular Profiles: How many per cell? What can they tell us?

Topics

  • Chris Heffelfinger presents: Systematic Variation in Human Gene Expression Patterns in Human Cancer Cell Lines
    Douglas T. Ross et al (2000)
    Nature Genetics 24:227-235 [PDF]
  • Cellular Profiles: How many profiles can a cell have?
  • Exploring gene expression profile patterns
Material
  • Presentation: Introducing expression profiles
  • Program: StuffIt download. Program unpacks the set of files given below.
  • Data files: WindleBBSI.sit, contains 21 data files to be used in the simulation plus a PowerPoint presentation. Use StuffIt to decompress the files.
  • Program: TreeView download. Program aids in displaying clustered expression data.
  • Link: Gene Ontology Consortium, a group effort to define gene descriptions in a systematic way.

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