VCU Bioinformatics and Bioengineering Summer Institute
Virginia Commonwealth University
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Research Simulation
Prediction of protein-RNA interaction
through molecular modeling
Thursday, June 19, 2003

Calculation of free energies of binding from protein-RNA structures (cont)

Background Material (same as for Wednesday)
  • Reading: De Guzman et al (1999). Protein-RNA recognition. Biopolymers 48:181-195
  • Reading: Shiels et al (2002). Investigation of a conserved stacking interaction in target site recognition by the U1A protein. Nucl Acids Res 30:550-558

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