Click spot to see in array context
| Biological Information |
|---|
| Sequence Name | SLL1626 |
|---|
| GENE_NAME | lexA |
|---|
| PRODUCT | SOS function regulatory protein |
|---|
| BEG_COORD | 1318719 |
|---|
| END_COORD | 1319330 |
|---|
| LENGTH | 204 |
|---|
| STRAND | - |
|---|
| SYSTEMATIC NAME | SLL1626 |
|---|
| CATEGORY | Regulatory functions |
|---|
View expression history of this entity
| | Spot | 9 |
|---|
| SUID | 469722 |
|---|
| Ch1 Intensity (Mean) | 1761 |
|---|
| Ch1 Background (Median) | 188 |
|---|
| Ch1 Net (Mean) | 1573 |
|---|
| Ch2 Intensity (Mean) | 11381 |
|---|
| Ch2 Net (Mean) | 11178 |
|---|
| Ch2 Background (Median) | 203 |
|---|
| Ch2 Normalized Background (Median) | 162 |
|---|
| Ch2 Normalized Net (Mean) | 8942 |
|---|
| Ch2 Normalized Intensity (Mean) | 9105 |
|---|
| Regression Correlation | .99 |
|---|
| Spot Flag | 0 |
|---|
| % CH1 PIXELS > BG + 1SD | 99 |
|---|
| % CH2 PIXELS > BG + 1SD | 100 |
|---|
| Regression Ratio | 7.199 |
|---|
| Number of Background Pixels | 780 |
|---|
| Number of Spot Pixels | 156 |
|---|
| Box Top | 69 |
|---|
| Box Left | 249 |
|---|
| Box Right | 264 |
|---|
| Box Bottom | 84 |
|---|
| Sum of Ch2 Foreground Pixel Intensities | |
|---|
| Sum of Ch1 Foreground Pixel Intensities | |
|---|
| Log(base2) of R/G Normalized Ratio (Mean) | 2.507 |
|---|
| G/R (Mean) | .141 |
|---|
| G/R Normalized (Mean) | .176 |
|---|
| R/G (Mean) | 7.106 |
|---|
| R/G Normalized (Mean) | 5.685 |
|---|
| Channel 2 Background (Mean) | 209 |
|---|
| Channel 1 Background (Mean) | 188 |
|---|
| Ch1 Intensity (Median) | 1876 |
|---|
| Ch1 Net (Median) | 1688 |
|---|
| % of saturated Ch1 pixels | 0 |
|---|
| Std Dev of Ch1 Intensity | 612 |
|---|
| Std Dev of Ch1 Background | 21 |
|---|
| Ch2 Net (Median) | 11700 |
|---|
| Ch2 Intensity (Median) | 11903 |
|---|
| % of saturated Ch2 pixels | 0 |
|---|
| Std Dev of Ch2 Intensity | 4400 |
|---|
| Std Dev of Ch2 Background | 82 |
|---|
| Normalized Ch2 Net (Median) | 9360 |
|---|
| Normalized Ch2 Intensity (Median) | 9522 |
|---|
| Diameter of the spot | 150 |
|---|
| R/G Mean (per pixel) | 7.325 |
|---|
| R/G Median (per pixel) | 7.118 |
|---|
| % CH1 PIXELS > BG + 2SD | 97 |
|---|
| % CH2 PIXELS > BG + 2SD | 98 |
|---|
| R/G (Median) | 6.931 |
|---|
| Std Dev of pixel intensity ratios | 1.277 |
|---|
| Sum of mean intensities | 12751 |
|---|
| Sum of median intensities | 13388 |
|---|
| X coordinate (whole array, in microns) | 4310 |
|---|
| Y coordinate (whole array, in microns) | 3290 |
|---|
| Log(base2) of R/G Normalized Ratio (Median) | 2.471 |
|---|
| R/G Normalized (Median) | 5.545 |
|---|
| Ch2 Signal-to-Noise Ratio | |
|---|
| Ch1 Signal-to-Noise Ratio | |
|---|
| Ch1 Background Intensity Coefficient of Variation | |
|---|
| Ch2 Background Intensity Coefficient of Variation | |
|---|
| Ch1 Foreground Intensity Coefficient of Variation | |
|---|
| Ch2 Foreground Intensity Coefficient of Variation | |
|---|
| Actual Ch1 Background Used in Calculations | |
|---|
| Actual Ch2 Background Used in Calculations | |
|---|
| Autoflag | |
|---|
| Spot Circularity | |
|---|
| Channel 1 Mean Intensity / Median Background Intensity | 9.367 |
|---|
| Channel 2 Normalized (Mean Intensity / Median Background Intensity) | 56.204 |
|---|
| Overall Intensity A (sqrt(RG)) (Means) | 3750.435 |
|---|
| Overall Intensity A (sqrt(RG)) (Medians) | 3974.881 |
|---|
|
