Click spot to see in array context
Biological Information | Sequence Name | SLL0185 | END_COORD | 2730071 | LENGTH | 420 | STRAND | - | SYSTEMATIC NAME | SLL0185 | CATEGORY | Hypothetical | PRODUCT | unknown protein | BEG_COORD | 2728812 |
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View expression history of this entity
| Spot | 861 | SUID | 469756 | Ch1 Intensity (Mean) | 11451 | Ch1 Background (Median) | 200 | Ch1 Net (Mean) | 11251 | Ch2 Intensity (Mean) | 5221 | Ch2 Net (Mean) | 5001 | Ch2 Background (Median) | 220 | Ch2 Normalized Background (Median) | 176 | Ch2 Normalized Net (Mean) | 4001 | Ch2 Normalized Intensity (Mean) | 4177 | Regression Correlation | .99 | Spot Flag | 0 | % CH1 PIXELS > BG + 1SD | 98 | % CH2 PIXELS > BG + 1SD | 96 | Regression Ratio | .44 | Number of Background Pixels | 650 | Number of Spot Pixels | 156 | Box Top | 415 | Box Left | 577 | Box Right | 592 | Box Bottom | 430 | Sum of Ch2 Foreground Pixel Intensities | | Sum of Ch1 Foreground Pixel Intensities | | Log(base2) of R/G Normalized Ratio (Mean) | -1.492 | G/R (Mean) | 2.25 | G/R Normalized (Mean) | 2.812 | R/G (Mean) | .444 | R/G Normalized (Mean) | .356 | Channel 2 Background (Mean) | 243 | Channel 1 Background (Mean) | 208 | Ch1 Intensity (Median) | 12051 | Ch1 Net (Median) | 11851 | % of saturated Ch1 pixels | 0 | Std Dev of Ch1 Intensity | 4795 | Std Dev of Ch1 Background | 57 | Ch2 Net (Median) | 5148 | Ch2 Intensity (Median) | 5368 | % of saturated Ch2 pixels | 0 | Std Dev of Ch2 Intensity | 2163 | Std Dev of Ch2 Background | 179 | Normalized Ch2 Net (Median) | 4118 | Normalized Ch2 Intensity (Median) | 4294 | Diameter of the spot | 150 | R/G Mean (per pixel) | .448 | R/G Median (per pixel) | .446 | % CH1 PIXELS > BG + 2SD | 97 | % CH2 PIXELS > BG + 2SD | 95 | R/G (Median) | .434 | Std Dev of pixel intensity ratios | 1.354 | Sum of mean intensities | 16252 | Sum of median intensities | 16999 | X coordinate (whole array, in microns) | 7590 | Y coordinate (whole array, in microns) | 6750 | Log(base2) of R/G Normalized Ratio (Median) | -1.525 | R/G Normalized (Median) | .348 | Ch2 Signal-to-Noise Ratio | | Ch1 Signal-to-Noise Ratio | | Ch1 Background Intensity Coefficient of Variation | | Ch2 Background Intensity Coefficient of Variation | | Ch1 Foreground Intensity Coefficient of Variation | | Ch2 Foreground Intensity Coefficient of Variation | | Actual Ch1 Background Used in Calculations | | Actual Ch2 Background Used in Calculations | | Autoflag | | Spot Circularity | | Channel 1 Mean Intensity / Median Background Intensity | 57.255 | Channel 2 Normalized (Mean Intensity / Median Background Intensity) | 23.733 | Overall Intensity A (sqrt(RG)) (Means) | 6709.341 | Overall Intensity A (sqrt(RG)) (Medians) | 6985.873 |
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