Click spot to see in array context
| Biological Information |
|---|
| Sequence Name | SLR0741 |
|---|
| END_COORD | 131790 |
|---|
| LENGTH | 225 |
|---|
| STRAND | + |
|---|
| SYSTEMATIC NAME | SLR0741 |
|---|
| CATEGORY | Regulatory functions |
|---|
| GENE_NAME | phoU |
|---|
| PRODUCT | a negative regulator of pho regulon |
|---|
| BEG_COORD | 131116 |
|---|
View expression history of this entity
| | Spot | 22 |
|---|
| SUID | 471075 |
|---|
| Ch1 Intensity (Mean) | 10297 |
|---|
| Ch1 Background (Median) | 175 |
|---|
| Ch1 Net (Mean) | 10122 |
|---|
| Ch2 Intensity (Mean) | 13561 |
|---|
| Ch2 Net (Mean) | 13379 |
|---|
| Ch2 Background (Median) | 182 |
|---|
| Ch2 Normalized Background (Median) | 146 |
|---|
| Ch2 Normalized Net (Mean) | 10703 |
|---|
| Ch2 Normalized Intensity (Mean) | 10849 |
|---|
| Regression Correlation | 1 |
|---|
| Spot Flag | 0 |
|---|
| % CH1 PIXELS > BG + 1SD | 91 |
|---|
| % CH2 PIXELS > BG + 1SD | 94 |
|---|
| Regression Ratio | 1.329 |
|---|
| Number of Background Pixels | 914 |
|---|
| Number of Spot Pixels | 156 |
|---|
| Box Top | 69 |
|---|
| Box Left | 511 |
|---|
| Box Right | 526 |
|---|
| Box Bottom | 84 |
|---|
| Sum of Ch2 Foreground Pixel Intensities | |
|---|
| Sum of Ch1 Foreground Pixel Intensities | |
|---|
| Log(base2) of R/G Normalized Ratio (Mean) | .081 |
|---|
| G/R (Mean) | .757 |
|---|
| G/R Normalized (Mean) | .946 |
|---|
| R/G (Mean) | 1.322 |
|---|
| R/G Normalized (Mean) | 1.057 |
|---|
| Channel 2 Background (Mean) | 1645 |
|---|
| Channel 1 Background (Mean) | 1999 |
|---|
| Ch1 Intensity (Median) | 10591 |
|---|
| Ch1 Net (Median) | 10416 |
|---|
| % of saturated Ch1 pixels | 0 |
|---|
| Std Dev of Ch1 Intensity | 2770 |
|---|
| Std Dev of Ch1 Background | 6320 |
|---|
| Ch2 Net (Median) | 13727 |
|---|
| Ch2 Intensity (Median) | 13909 |
|---|
| % of saturated Ch2 pixels | 0 |
|---|
| Std Dev of Ch2 Intensity | 3797 |
|---|
| Std Dev of Ch2 Background | 5078 |
|---|
| Normalized Ch2 Net (Median) | 10982 |
|---|
| Normalized Ch2 Intensity (Median) | 11127 |
|---|
| Diameter of the spot | 150 |
|---|
| R/G Mean (per pixel) | 1.315 |
|---|
| R/G Median (per pixel) | 1.316 |
|---|
| % CH1 PIXELS > BG + 2SD | 16 |
|---|
| % CH2 PIXELS > BG + 2SD | 84 |
|---|
| R/G (Median) | 1.318 |
|---|
| Std Dev of pixel intensity ratios | 1.105 |
|---|
| Sum of mean intensities | 23501 |
|---|
| Sum of median intensities | 24143 |
|---|
| X coordinate (whole array, in microns) | 6930 |
|---|
| Y coordinate (whole array, in microns) | 3290 |
|---|
| Log(base2) of R/G Normalized Ratio (Median) | .076 |
|---|
| R/G Normalized (Median) | 1.054 |
|---|
| Ch2 Signal-to-Noise Ratio | |
|---|
| Ch1 Signal-to-Noise Ratio | |
|---|
| Ch1 Background Intensity Coefficient of Variation | |
|---|
| Ch2 Background Intensity Coefficient of Variation | |
|---|
| Ch1 Foreground Intensity Coefficient of Variation | |
|---|
| Ch2 Foreground Intensity Coefficient of Variation | |
|---|
| Actual Ch1 Background Used in Calculations | |
|---|
| Actual Ch2 Background Used in Calculations | |
|---|
| Autoflag | |
|---|
| Spot Circularity | |
|---|
| Channel 1 Mean Intensity / Median Background Intensity | 58.84 |
|---|
| Channel 2 Normalized (Mean Intensity / Median Background Intensity) | 74.308 |
|---|
| Overall Intensity A (sqrt(RG)) (Means) | 10408.447 |
|---|
| Overall Intensity A (sqrt(RG)) (Medians) | 10695.257 |
|---|
|
