VCU Bioinformatics and Bioengineering Summer Institute
Parsing Blast Files - Questionnaire

Part I: Basic information

Your name 

Part II: Introduction to SNPs

1. Were you able to download the chimp chromosome sequence?

2. Were you able to run the blast comparisons described in the Scenario?

3. How comfortable are you now with the scenario about the apparent failure of Blast to find a short sequence in the chimp chromosome? (perhaps elaborate in box below) 

4. How comfortable are you with the notion of CG-dinucleotides and mutational hotspots?

5. Comments/requests on this section?

Part III: Miscellaneous

6. Comments, concerns, questions?

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