<http://www.tigr.org/>
<http://www.tigr.org/tigr-scripts/CMR2/CMRHomePage.spl>
<http://www.tigr.org/tigr-scripts/CMR2/CMRHomePage.spl>
<http://www.tigr.org/tigr-scripts/CMR2/CMRGenomes.spl>
<http://tigrblast.tigr.org/cmr-blast/>
<http://www.tigr.org/tigr-scripts/CMR2/webmum/mumplot>
<http://www.tigr.org/CMR2/Links.shtml>
<http://www.tigr.org/CMR2/NewUsers.shtml>

------------------------------------------------------------------------

BLASTN 2.0MP-WashU [27-Aug-2000] [linux-i686 21:46:47 28-Aug-2000]

Copyright (C) 1996-2000 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference <http://www.ncbi.nlm.nih.gov/htbin-post/Entrez/query?uid=2231712&form=6&db=m&Dopt=b>:  Gish, W. (1996-2000) http://blast.wustl.edu

Notice:  this program and its default parameter settings are optimized to find
nearly identical sequences rapidly.  To identify weak similarities encoded in
nucleic acid, use BLASTX, TBLASTN or TBLASTX.

Query=  Anabaena_Chromosome____2602501->2605200___
        (2700 letters)

Database:  /usr/local/db/prok/internal/nostoc_pcc_7120/annotation_dbs/nostoc_pc
           c_7120.1con
           7 sequences; 7,211,789 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N


ntns01:8:cmr_contig_192 <http://www.tigr.org/tigr-scripts/CMR2/infxview?db=omnium&asmbl_id=192&startbp=1&stopbp=300000&width=1000&height=300> Nostoc sp. PCC 7120  Chromosome T... 12545 <#ntns01:8:cmr_contig_192>  0.0       2
ntns01:9:cmr_contig_193 <http://www.tigr.org/tigr-scripts/CMR2/infxview?db=omnium&asmbl_id=193&startbp=1&stopbp=300000&width=1000&height=300> Nostoc sp. PCC 7120  Plasmid pCC7...   390 <#ntns01:9:cmr_contig_193>  4.7e-14   2
ntns01:11:cmr_contig_195 <http://www.tigr.org/tigr-scripts/CMR2/infxview?db=omnium&asmbl_id=195&startbp=1&stopbp=300000&width=1000&height=300> Nostoc sp. PCC 7120  Plasmid pCC...   255 <#ntns01:11:cmr_contig_195>  0.0029    1


      Distribution of Blast Hits on the Query Sequence



>ntns01:8:cmr_contig_192 <http://www.tigr.org/tigr-scripts/CMR2/infxview?db=omnium&asmbl_id=192&startbp=1&stopbp=300000&width=1000&height=300> Nostoc sp. PCC 7120  Chromosome Tue Jan 21 19:52:52
            2003
        Length = 6,413,771

  Plus Strand HSPs:

 Score = 12545 (1888.3 bits), Expect = 0.0, Sum P(2) = 0.0
 Identities = 2509/2509 (100%), Positives = 2509/2509 (100%), Strand = Plus / Plus

Query:     192 CCATAGTCAACAGCCAACTACTATAGATAATATGCAACTGCTGCATTGGTTGAGCCAATT 251
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2602692 CCATAGTCAACAGCCAACTACTATAGATAATATGCAACTGCTGCATTGGTTGAGCCAATT 2602751

Query:     252 TCCCCCATCATTTACTGGCAAAAATCTGATAAGGTATCAGCTGCAAATCAATTTAAATTG 311
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2602752 TCCCCCATCATTTACTGGCAAAAATCTGATAAGGTATCAGCTGCAAATCAATTTAAATTG 2602811

Query:     312 CTTTAATGCCAACTATATCGGGTTTTTATTCTTATTGACCAAAAGAATGGGATACAAGCC 371
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2602812 CTTTAATGCCAACTATATCGGGTTTTTATTCTTATTGACCAAAAGAATGGGATACAAGCC 2602871

Query:     372 CCGTCGTTCTAGGACGGCTTTTCTTGATTTCTGATGTACTCTTTTAGGATCTCTAATGGC 431
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2602872 CCGTCGTTCTAGGACGGCTTTTCTTGATTTCTGATGTACTCTTTTAGGATCTCTAATGGC 2602931

Query:     432 GCACCTCCTACGGACACAGCGAAATAACTGGGACTCCACAAGGCTTCTTTGTGGGGTTTC 491
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2602932 GCACCTCCTACGGACACAGCGAAATAACTGGGACTCCACAAGGCTTCTTTGTGGGGTTTC 2602991

Query:     492 TTGTATCCGGCTTGTCCATACCTGCGACTAGAGACACCTTTTAAAGCATTAACAATTTGA 551
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2602992 TTGTATCCGGCTTGTCCATACCTGCGACTAGAGACACCTTTTAAAGCATTAACAATTTGA 2603051

Query:     552 GAGATGGATAACTTGGGGGGATATTCAATAAGCGCGTGAACATGGTTGTCTTCACCGTTA 611
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603052 GAGATGGATAACTTGGGGGGATATTCAATAAGCGCGTGAACATGGTTGTCTTCACCGTTA 2603111

Query:     612 AATTCAATTACTTGAAAATCCATTTTATTAGCTACCTCTCTAAACGTTTTTTCAATTAGT 671
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603112 AATTCAATTACTTGAAAATCCATTTTATTAGCTACCTCTCTAAACGTTTTTTCAATTAGT 2603171

Query:     672 TCAATACTTTCCTTTGTGAATACAGACTTACGATACTTGGTAACACAGACCAAATGAATT 731
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603172 TCAATACTTTCCTTTGTGAATACAGACTTACGATACTTGGTAACACAGACCAAATGAATT 2603231

Query:     732 TTTAAGTCCGTAACAGAGTGTCTTTCCCTGCGAAACTGGCTTGTCACTTCTTGTAGACCC 791
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603232 TTTAAGTCCGTAACAGAGTGTCTTTCCCTGCGAAACTGGCTTGTCACTTCTTGTAGACCC 2603291

Query:     792 TTCGGGTGAGCAGTCGCTACAAGTCGGGGAACCCGCCCAACGCGCTGCTCACCAATGTAT 851
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603292 TTCGGGTGAGCAGTCGCTACAAGTCGGGGAACCCGCCCAACGCGCTGCTCACCAATGTAT 2603351

Query:     852 AATACTTCTACAGACCAATTATACATTATCAATGAAAGCCAGATATCAATTCCGGTTCTA 911
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603352 AATACTTCTACAGACCAATTATACATTATCAATGAAAGCCAGATATCAATTCCGGTTCTA 2603411

Query:     912 CCCGACAGACCAACAAAAGCAACTGTTAGCGCAGTTGTTTGGTTGCGTTCGCGTAGTCTG 971
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603412 CCCGACAGACCAACAAAAGCAACTGTTAGCGCAGTTGTTTGGTTGCGTTCGCGTAGTCTG 2603471

Query:     972 GAATGATGCTCTGGCTGTTTGCAAACAGTCCGAAAAGCTTCCTAGTAACAACGACTTGCA 1031
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603472 GAATGATGCTCTGGCTGTTTGCAAACAGTCCGAAAAGCTTCCTAGTAACAACGACTTGCA 2603531

Query:    1032 AAAGCTGGTGATTACGCAAGCTAAAAAGACTGATGAGCGTTCATGGTTATCTGATGTTTC 1091
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603532 AAAGCTGGTGATTACGCAAGCTAAAAAGACTGATGAGCGTTCATGGTTATCTGATGTTTC 2603591

Query:    1092 TAATATCCCTTTACAACAATCTGTTGCTGATTTAGGAGTTGCTTACAAAAACTTTTTTGA 1151
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603592 TAATATCCCTTTACAACAATCTGTTGCTGATTTAGGAGTTGCTTACAAAAACTTTTTTGA 2603651

Query:    1152 TTCACTCAAGGGTAAACGCAAAGGCAAAAAAGTAGGCACACCCAAGTTTAAGAAGAAGAC 1211
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603652 TTCACTCAAGGGTAAACGCAAAGGCAAAAAAGTAGGCACACCCAAGTTTAAGAAGAAGAC 2603711

Query:    1212 AAGTAAACAATCAGCCAGATTTAGAATTGGTGGTTTTTCGATTAAAGGAGATGAAGTCTA 1271
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603712 AAGTAAACAATCAGCCAGATTTAGAATTGGTGGTTTTTCGATTAAAGGAGATGAAGTCTA 2603771

Query:    1272 CCTAGCTAAAATTGGCAACGTCAAGCCTCTAAAGTCAAGACAATTACCATCTGCACCAAG 1331
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603772 CCTAGCTAAAATTGGCAACGTCAAGCCTCTAAAGTCAAGACAATTACCATCTGCACCAAG 2603831

Query:    1332 TAGTGTAACAGTCATTAAAGACTGTGCTAATCGTTATTTTCTTAGCTTTGTCGTAGAAGT 1391
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603832 TAGTGTAACAGTCATTAAAGACTGTGCTAATCGTTATTTTCTTAGCTTTGTCGTAGAAGT 2603891

Query:    1392 AGAGCCTATTCAATCTGAAGCTAAAAACCAAAGCATTGGTATTGATTTAGGAATCAAAAC 1451
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603892 AGAGCCTATTCAATCTGAAGCTAAAAACCAAAGCATTGGTATTGATTTAGGAATCAAAAC 2603951

Query:    1452 TTTTGCGGTTATGAGTAATGGAGAAAAAGCAATCAGTCCCGATTACTCAAAGAAAGACCG 1511
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603952 TTTTGCGGTTATGAGTAATGGAGAAAAAGCAATCAGTCCCGATTACTCAAAGAAAGACCG 2604011

Query:    1512 CAAAATTCGCAAACTGCAACGCAAGATAGCAAGACAACAGAAGGGGTCTAAGCGTCGTGA 1571
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604012 CAAAATTCGCAAACTGCAACGCAAGATAGCAAGACAACAGAAGGGGTCTAAGCGTCGTGA 2604071

Query:    1572 ACGAACCCGCTTAAGAATCGCCAAGCAACACAACAAAATTGCGGATACCCGAAAAGACTT 1631
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604072 ACGAACCCGCTTAAGAATCGCCAAGCAACACAACAAAATTGCGGATACCCGAAAAGACTT 2604131

Query:    1632 CCTTCACAAACTTTCAACCAAAGTAGTTAGTGAAAACCAAGCTATTGTTTTGGAAGATTT 1691
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604132 CCTTCACAAACTTTCAACCAAAGTAGTTAGTGAAAACCAAGCTATTGTTTTGGAAGATTT 2604191

Query:    1692 GAATGTGTCAGGAATGGTCAAGAATCGTAAGTTAGCAAGAATAATTAGCTTGCAGGGATG 1751
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604192 GAATGTGTCAGGAATGGTCAAGAATCGTAAGTTAGCAAGAATAATTAGCTTGCAGGGATG 2604251

Query:    1752 GAGAGAGTTTCGGGTATTTTGTGAGAGTAAATCTGAAAAACTTAATCGGGATTTCAGGGT 1811
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604252 GAGAGAGTTTCGGGTATTTTGTGAGAGTAAATCTGAAAAACTTAATCGGGATTTCAGGGT 2604311

Query:    1812 CATTAGTAGATGGGAACCTACTAGCCAAACTTGTTCTTGTTGTGGGTATAGGTGGGGCAA 1871
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604312 CATTAGTAGATGGGAACCTACTAGCCAAACTTGTTCTTGTTGTGGGTATAGGTGGGGCAA 2604371

Query:    1872 GATTGATTTATCTGTGCGCTCAGTGTTGTGCTTAAACTGCAATACTGAACACGACAGAGA 1931
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604372 GATTGATTTATCTGTGCGCTCAGTGTTGTGCTTAAACTGCAATACTGAACACGACAGAGA 2604431

Query:    1932 TGAGAACGCATCCCAAAATATAAAAATGGTCGGCATGGGGCATCGGCACGACCTTAAACG 1991
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604432 TGAGAACGCATCCCAAAATATAAAAATGGTCGGCATGGGGCATCGGCACGACCTTAAACG 2604491

Query:    1992 GGCGCAGAGGACAGGTAAGACTGGTTCGCCAGCACAGTCCGGTGAAGCGTCAAGAATCAC 2051
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604492 GGCGCAGAGGACAGGTAAGACTGGTTCGCCAGCACAGTCCGGTGAAGCGTCAAGAATCAC 2604551

Query:    2052 CGCACCTTTAGGTCGGTGAGTATGTCAAAATTCTAGCGACCCTCTGGGTAACCAGTGCTA 2111
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604552 CGCACCTTTAGGTCGGTGAGTATGTCAAAATTCTAGCGACCCTCTGGGTAACCAGTGCTA 2604611

Query:    2112 GTAAGATTTGTAGTGAAGTATGTTGAGTTAAAGTTATTTTGGGTCACACTTCTAGAATGC 2171
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604612 GTAAGATTTGTAGTGAAGTATGTTGAGTTAAAGTTATTTTGGGTCACACTTCTAGAATGC 2604671

Query:    2172 CTAAAAATTTTCTTTCGAGGATATTGCTTCTAGAACCGCATAACCTAGTCATAATAAATT 2231
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604672 CTAAAAATTTTCTTTCGAGGATATTGCTTCTAGAACCGCATAACCTAGTCATAATAAATT 2604731

Query:    2232 GCAGCTTCATGTTGATAAGCTTTCATGCAATTATTTGCGTTGCTGCTCTACATAACCGTC 2291
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604732 GCAGCTTCATGTTGATAAGCTTTCATGCAATTATTTGCGTTGCTGCTCTACATAACCGTC 2604791

Query:    2292 TCCTCTATAAGAGAAATACTTGCATCGAATTATACGCAAAATCTTCTCATTTCTCATCTT 2351
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604792 TCCTCTATAAGAGAAATACTTGCATCGAATTATACGCAAAATCTTCTCATTTCTCATCTT 2604851

Query:    2352 TTCTTTACAGCCTTTACCTGTTAAAACAATTAAAGCTAAATTATGATCCCCCTGGTCAAA 2411
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604852 TTCTTTACAGCCTTTACCTGTTAAAACAATTAAAGCTAAATTATGATCCCCCTGGTCAAA 2604911

Query:    2412 TATAGGACTAAAGTTTGATTTTTGAATAAACTCCTTACCTATCAAAAAGCATTTTCCTCT 2471
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604912 TATAGGACTAAAGTTTGATTTTTGAATAAACTCCTTACCTATCAAAAAGCATTTTCCTCT 2604971

Query:    2472 ATTCTTATCCCAAGCAAGGCAATTCAAAAACCAAAACTGACTGCTATATTTTGCTTTTCT 2531
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604972 ATTCTTATCCCAAGCAAGGCAATTCAAAAACCAAAACTGACTGCTATATTTTGCTTTTCT 2605031

Query:    2532 GCTATTAGTCTAACCACTGAGGTAGTGAGAATTACTCAGCGTGGGTGAAATTTTAATTTG 2591
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2605032 GCTATTAGTCTAACCACTGAGGTAGTGAGAATTACTCAGCGTGGGTGAAATTTTAATTTG 2605091

Query:    2592 TCTGATGAATTGGCTTTTTTAGGATAAAAATCACTCGATAGGGCGTATCAAGCATGACCA 2651
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2605092 TCTGATGAATTGGCTTTTTTAGGATAAAAATCACTCGATAGGGCGTATCAAGCATGACCA 2605151

Query:    2652 CTATGGCTGACCCAACTAACAGCAAAGTACCTGATAATCAACCAACACT 2700
               |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2605152 CTATGGCTGACCCAACTAACAGCAAAGTACCTGATAATCAACCAACACT 2605200

 Score = 665 (105.8 bits), Expect = 0.0, Sum P(2) = 0.0
 Identities = 133/133 (100%), Positives = 133/133 (100%), Strand = Plus / Plus

Query:       1 CCTTTGCAGATTCTAAGGCTTGAGCGACAGCAGCGATCGCTTGATTTTTCGCCTCGGTAG 60
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2602501 CCTTTGCAGATTCTAAGGCTTGAGCGACAGCAGCGATCGCTTGATTTTTCGCCTCGGTAG 2602560

Query:      61 ACAGCATCGCCAATAAACTTGCAGCTTGGCGAGTTTGTTGAGCGATGTCATTCAAGGAAG 120
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2602561 ACAGCATCGCCAATAAACTTGCAGCTTGGCGAGTTTGTTGAGCGATGTCATTCAAGGAAG 2602620

Query:     121 AAGCAACTTGGAG 133
               |||||||||||||
Sbjct: 2602621 AAGCAACTTGGAG 2602633

 Score = 319 (53.9 bits), Expect = 0.00042, Sum P(2) = 0.00042
 Identities = 359/659 (54%), Positives = 359/659 (54%), Strand = Plus / Plus

Query:    1320 ATCTGCACCAAGTAGTGTAACAGTCATTAAAGA-CTGTGCTAATCGTTATTTTCTTAGCT 1378
               || || ||| ||||   | ||||| |     || | |     | || |  ||| | ||||
Sbjct: 1792761 ATGTGAACCTAGTACCATCACAGTTAGACTTGAACCGAATGGA-CGCTGGTTTGTCAGCT 1792819

Query:    1379 TTGTCGTAG-AA-G-TAGAGCCTATTCAATC-TGAAGCTAAAAACCAAAGCA-TTGGTAT 1433
               | | || |  || | |  | || |   || | || | | |      |  ||  ||||| |
Sbjct: 1792820 T-G-CGAATCAATGATCCAACCGACCAAACCATGCAACCAGTTGATAGTGCTGTTGGTTT 1792877

Query:    1434 TGATTTAGGAATCAAAACTTTTGCGGTTATGAGTAATGGAGAAAAAGCAAT-CAGTCCCG 1492
                ||| | ||  | |   || | |      ||||||  || ||||| | | | |   ||| 
Sbjct: 1792878 GGATGTTGGGGTTAGTTCTCTCGTTACCCTGAGTACAGGTGAAAA-G-ATTGCTAACCCC 1792935

Query:    1493 ATTACTCAA-AGAAAGACCGCAAAAT-TCG-CAAACTGCAACGCAAGA-T---AGCAAGA 1545
               |   |  |  ||    ||  | |||  | | | ||  |||  | |||  |   |||   |
Sbjct: 1792936 AAGGCATATGAGGCGCACTACCAAAGGTTGTCTAAG-GCACAG-AAGTCTTTGAGCCGTA 1792993

Query:    1546 CAACAGAAGGGGTCTAAGCGTCGTGA-ACGAACCCG-CTTAAGAATCGCCAAGCAACACA 1603
                ||||||| |  |||     | | || | |  |  | || || | | ||    |  || |
Sbjct: 1792994 -AACAGAAAGCCTCTCGAAATTGGGATAAGG-CAAGACTCAA-AGTAGCTCGTCTTCA-A 1793049

Query:    1604 AC-AAAATTGCGGATACCCGAAAAGACTTCCTTCACAAACTTTCAACCAAAGTAGTTAGT 1662
                | |||||| | ||  |  ||||||||    | ||||||||  ||||   | | ||| ||
Sbjct: 1793050 GCTAAAATTTCTGACTCTAGAAAAGACCATTTGCACAAACTGACAACTCGACTGGTTCGT 1793109

Query:    1663 GAAAACCAAGCTATTGTTTTGGAAGATTTGAATGTGTCAGGA-ATGGTCAAGAATCGTAA 1721
               ||||||||| | || ||  | || ||||||   || | || | |||||||| ||||  ||
Sbjct: 1793110 GAAAACCAAACGATAGTGGTTGAGGATTTGGCGGT-TAAGAATATGGTCAAAAATCCCAA 1793168

Query:    1722 GTTAGCAAGAATAATTAGCT-TGCAGGGATGGAGAGAGTTTCGGGTATTTTG-TGAGAGT 1779
               | | ||  |    || ||   ||| |  ||||   || ||  ||  |      || || |
Sbjct: 1793169 GCTTGCCCGTGCTATCAGTGATGCTGC-ATGGTCGGAATT--GGTAAGACAACTG-GATT 1793224

Query:    1780 A-AATCTGAAAAACT-TAATCGGGATTTCAGGGTCATTAGTAGATGGGAACCTA-CTAGC 1836
               | ||    ||    | |  |||  | ||       |||    | |||   |||| ||  |
Sbjct: 1793225 ACAAAGCCAAGTGGTATGGTCGAAACTTGGTAAAGATTGACCGTTGGTTTCCTAGCT--C 1793282

Query:    1837 CAAACT-TGTTCTTGTTGTGGGTATAGGTGGGGCAAGATTGAT-TTATCTGTGCGCTCAG 1894
                ||||  ||       |||||| |||  ||  |  | | ||   ||   |||  |   ||
Sbjct: 1793283 TAAACGCTGCGGAAACTGTGGGCATAT-TGTTGATAAACTGCCGTTGAATGTTAGAG-AG 1793340

Query:    1895 TGTTGTGCTTA-AACTGCAATACTGAACACGACAGAGATGAGAACGCATCCCAAAATAT 1952
               ||   |  |   ||||||   ||  | |||||||| |||   |||||   ||  |||||
Sbjct: 1793341 TGGGATTGTCCCAACTGCGGAACACACCACGACAGGGATATCAACGCCAGCCGGAATAT 1793399

 Score = 235 (41.3 bits), Expect = 5.1e-21, Sum P(3) = 5.1e-21
 Identities = 87/122 (71%), Positives = 87/122 (71%), Strand = Plus / Plus

Query:     762 CGAAACTGGCTTGTCACTTCTTGTAGA--CCCTTCGGGTGA--GCAGTCGCTACAAGTCG 817
               |||  ||  |  || ||| ||   |||  |||| ||||  |  ||||| |||||||||||
Sbjct: 4409640 CGACCCTTACGGGT-ACT-CTCCGAGAACCCCTCCGGGGAACAGCAGTTGCTACAAGTCG 4409697

Query:     818 GGGAACCCGCCCAACGCGCTGCT-CACCAATGTATAATACTTCTACAGACCAATTA-TAC 875
               ||||||||||||||||| ||||| ||| || | | |||    | || ||| ||| | || 
Sbjct: 4409698 GGGAACCCGCCCAACGCACTGCTTCAC-AACGAACAATTGA-CAACTGACAAATGACTAA 4409755

Query:     876 AT 877
               ||
Sbjct: 4409756 AT 4409757

 Score = 199 (35.9 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
 Identities = 123/197 (62%), Positives = 123/197 (62%), Strand = Plus / Plus

Query:     690 AATACAGACTTA---CGATACTTGGTAACACAGACCAAATGAATTTTTAAGTCCGTAACA 746
               || ||||||| |   | ||||||  ||| ||    | ||  ||| |  | ||  |  |||
Sbjct: 3207985 AAAACAGACTAAAATCCATACTTT-TAAAACCTCTCTAAAAAATATC-A-GTA-GAGACA 3208040

Query:     747 GAGTGTCTTTCCCTGCGAAACTGGCTTGTCACTTCTT-GTAGACCCTTCGGGTGA-G-CA 803
                ||   |  | | | |   |||  |  || || |||  |   ||| | || |  | | ||
Sbjct: 3208041 TAGCAACGCTACAT-CTCTACTC-CGCGT-ACCTCTGCGCTTACC-TCCGCGCTACGGCA 3208096

Query:     804 GTCGCTACAAGTCGGGGAACCCGCCCAACGCGCTGC-TCACCAATG--TATAATACTTC- 859
               |||||| ||||||||  || |||||||||||||||| || ||  ||  | ||| ||||| 
Sbjct: 3208097 GTCGCTTCAAGTCGGCAAAGCCGCCCAACGCGCTGCCTCCCCTCTGCGTTTAA-ACTTCA 3208155

Query:     860 TACAGACCA-ATTATAC 875
               |  | || | | || ||
Sbjct: 3208156 TTTAAACAACAGTAAAC 3208172

 Score = 168 (31.3 bits), Expect = 4.1e-18, Sum P(3) = 4.1e-18
 Identities = 98/153 (64%), Positives = 98/153 (64%), Strand = Plus / Plus

Query:     802 CAGTCGCTACAAGTCGGGGAACCCGCCCAACGCGCTG-CTCACCA--ATGTATA-ATACT 857
               |||| ||| ||||||||  || ||||||||||| ||| ||| ||   | | | | |  ||
Sbjct: 4750613 CAGTTGCTTCAAGTCGGCAAAGCCGCCCAACGCACTGGCTCCCCTGCAAGGAGAGAGGCT 4750672

Query:     858 TCTACAGACCAATTATACATTATCAATGAAAGCCA-GATATCAATTCCGGTTCTACCCGA 916
               || | | |||  ||||   |  |||||  | | || | | |  | |||  | || | || 
Sbjct: 4750673 TC-AGA-ACCT-TTATTGTTCGTCAAT--ATGTCATGGTCTTTACTCCCCT-CTCCGCGT 4750726

Query:     917 CAGACCAACAAAAGCAACTGTTAGCGCAGTTGT 949
               | || | | ||| |   |||  ||||||| | |
Sbjct: 4750727 CGGAGCGA-AAA-GT--CTG--AGCGCAGGTTT 4750753

 Score = 159 (29.9 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
 Identities = 207/375 (55%), Positives = 207/375 (55%), Strand = Plus / Plus

Query:    2119 TTGTAGTGAAGTATGTTGAGTTAAAGTTATTTTGGGTCACA-CTTCTAGAATGCCTAAAA 2177
               |||  ||| || |||| | ||| || |  |   ||  ||   || || | |||| |    
Sbjct: 3365074 TTGGGGTGGAG-ATGTAG-GTTTAACTGCTGC-GGC-CATGTCTCCTTGTATGCGTCTGT 3365129

Query:    2178 ATT-TTCTTTCG-AGGATA-TT-GCTTCTAGAACCGCATAACCTAGTCATAATAAATTGC 2233
               ||  || ||| | || | | || |||   ||||  | ||  |||| |||| | | |  ||
Sbjct: 3365130 ATGCTTTTTTGGGAGAACAGTTAGCTA--AGAATGGTATT-CCTAATCATCA-ATAC-GC 3365184

Query:    2234 AGCTTC-ATGTTGA-TAAGCTTTCATGCAATTATTTGCGTTGCTGCTCTACAT-AACCGT 2290
                | ||  ||   || | | || |  |||  | |||| | |  |     ||||  ||  | 
Sbjct: 3365185 TGATTGGATTCGGACTTA-CTGTAGTGC--TGATTTTC-TACCATTAGTACAACAATTGG 3365240

Query:    2291 CTCCTCTATAAGAGAAATACT-TGCATCGAATTA-TACGCAAAATCTTCTCATTTCTCAT 2348
                   | ||  ||| || ||   | |  | |||   |   | |  ||  || ||  ||   
Sbjct: 3365241 AAAGTTTAGTAGAAAACTATGCTACTGCTAATACCTTAACCAGTTCAACTTATCGCTACG 3365300

Query:    2349 CTTTTCTTTAC-AGCCTTTACCTGTTAAAACAATTAAAGCTAAATTATGATCCCCCTGGT 2407
               |  | |||| | | |    |  | || || ||      | | | |||  ||| |   |  
Sbjct: 3365301 CCATGCTTTGCGAACAAGAATTTTTTCAAGCAGCCTG-GATGATTTA--ATCACA--GCA 3365355

Query:    2408 CAAA-TATAGGACTAAAGTTTGATTTTTGAATAAA-CTCCTTACCTATCAAAAAGCATT- 2464
               ||   ||||| ||| |  ||||||||||||||||| |||  |||  ||  |   || || 
Sbjct: 3365356 CATTCTATAGAACTCATATTTGATTTTTGAATAAAACTCAGTACACATTTATT-GCTTTC 3365414

Query:    2465 TTCCTCTATTCTTAT 2479
               |||| | || |  ||
Sbjct: 3365415 TTCC-CAATCCCCAT 3365428

 Score = 155 (29.3 bits), Expect = 5.1e-21, Sum P(3) = 5.1e-21
 Identities = 193/349 (55%), Positives = 193/349 (55%), Strand = Plus / Plus

Query:    2119 TTGTAGT-GAAGTATGT-TGAGT-TAAAGT-TATTTTGGGTC-ACACTTCTAGAATGCCT 2173
               ||||||| ||| ||  | ||| | |||| | || ||    || | | |  | |  | | |
Sbjct: 5987427 TTGTAGTTGAAATAATTCTGACTCTAAATTGTAATTAAACTCTAAAATATTTGGCT-CTT 5987485

Query:    2174 AAAAATTTTCTTTCGAGGATATTGCTTC-TAGAACCGCAT-A-A-CCTAGTCATAATAAA 2229
                |     || | | ||  | | |  |   || ||||  |  | | ||| ||  | ||   
Sbjct: 5987486 CAGTTCATTTTATGGAACAGAATAATAAATAAAACCCAAAGATAGCCT-GTATTCATTGC 5987544

Query:    2230 T-TG-CAGC--TTCATGTTGATAAGC-TTTCATGCAATTATTTGCGTTGC-TGCTCTAC- 2282
               | || | |   || | |||  | ||| |||| |  ||   | ||  ||   ||||| || 
Sbjct: 5987545 TGTGACTGGGTTTTAAGTTTTTGAGCCTTTC-TATAAAACTGTGATTTTAATGCTCCACC 5987603

Query:    2283 ATAACCGTCTCCTCTATAAGAGAAATACTTGCATCGAATTATACGCAAAA-TCT-TCTCA 2340
               ||||    |  | | | | |  ||||| || | |||||  |  ||   |  ||  | |  
Sbjct: 5987604 ATAAAAC-CAACGCAAGA-GCCAAATATTTTC-TCGAA--AG-CGTTTACCTCGCTGTGC 5987657

Query:    2341 TTTCTCATCTTTTCTTTACAGCCTTT-ACCTGTTAAAACAATTAAAGCTAAATTATGATC 2399
               |||||   ||  |  | | |   | | |  ||||| ||   || |  | |||   ||   
Sbjct: 5987658 TTTCTTTGCTGCTAATAATAAGTTATCAAATGTTATAAT--TTCACTCCAAAGATTGCCG 5987715

Query:    2400 CCCCTGGTCAAATATAGGACTAAAGTTTGATTTTTGAATAAACTCCTTA 2448
                  ||  |||  ||||||||| |  ||||||||||||| | | | | ||
Sbjct: 5987716 TGTCTTTTCATCTATAGGACTCATATTTGATTTTTGAACAGA-TACGTA 5987763

 Score = 153 (29.0 bits), Expect = 0.0095, Sum P(3) = 0.0094
 Identities = 39/48 (81%), Positives = 39/48 (81%), Strand = Plus / Plus

Query:    2033 GTGAAGCGTCAAGAATCACCGCACCTTTAGGTCGGTGAGTATGTCAAA 2080
               ||||  | | | |||||||||||| || ||| ||||||| ||||||||
Sbjct: 1793514 GTGAGTCTT-AGGAATCACCGCACTTTCAGGGCGGTGAGGATGTCAAA 1793560

 Score = 150 (28.6 bits), Expect = 8.4e-21, Sum P(3) = 8.4e-21
 Identities = 154/267 (57%), Positives = 154/267 (57%), Strand = Plus / Plus

Query:    1198 TTTAAGAAG--A--AGACAAGTAAACAATCAGCCAGATTTAGAATTGGTGGTTTTTCGAT 1253
               |||| ||||  |  ||  || | ||||| || ||||||||||| ||  |  |  |  |||
Sbjct: 5372689 TTTATGAAGTCATCAGTGAATTGAACAAGCAACCAGATTTAGACTTTATC-TACTCAGAT 5372747

Query:    1254 TAAAGGAGATGAAGTC-TACCTAGCTAAAATTGGCAACGTCAAGCCTCTAAAGTCAAGAC 1312
                |||| |  || | |  | || | | |  || || || |||||| |||| |  ||||  |
Sbjct: 5372748 -AAAG-AC-TGTATTAGTGCCAA-C-AGCAT-GGTAAGGTCAAGGCTCTTAC-TCAAACC 5372800

Query:    1313 A-ATTACCATCT-GCA--CCAAGTAGTGTAACAGTCATTAAAGAC-TGTGCTAATCGTTA 1367
               | | |    ||  | |  || | || |     | | ||| ||  | | ||   || | | 
Sbjct: 5372801 AGAGTGGAGTCCAGAAATCCTA-TATTCCGCTAATTATTTAACTCATTTGTGTATTGCTC 5372859

Query:    1368 TTTTCTTAGCTTTGTCGTAGA-AGTAGAGCCTATTCAATCTGAAGCTAAAAAC-CA-AAG 1424
                |  |  | |||| | | | | | | | | || |||   | ||| |  |   | |  |||
Sbjct: 5372860 GTCGCACA-CTTT-TGGAAAAGATTGGTGGCT-TTCGTCCAGAAACAGATGGCGCGCAAG 5372916

Query:    1425 CATTGGTATTGATTT--AGGAATCAAA 1449
                | ||| ||| ||||  | | |||| |
Sbjct: 5372917 -ACTGGGATTTATTTTTACGTATCACA 5372942

 Score = 150 (28.6 bits), Expect = 4.5, P = 0.99
 Identities = 174/300 (58%), Positives = 174/300 (58%), Strand = Plus / Plus

Query:    2167 AATGCCTAAAAATTT-TC-TTTCG-AGGATATTGCTT-CTAGAACCGCATAACCT-AGTC 2221
               |||  | ||||| |  || ||||  ||  | ||| |  || |  |    |||| | | ||
Sbjct: 1262188 AATAACAAAAAACTCGTCCTTTCCCAGCGT-TTGGTAACTCGTTCTAG-TAACTTCAATC 1262245

Query:    2222 A-TAATAAATTG--CAGCTTCATGTTGATAAGCTTTCATGCAATTA----TTTGCGT-TG 2273
               | | | ||||||  || ||    |  | |||  |  | || |||||    |||  || ||
Sbjct: 1262246 AGTTAGAAATTGGTCAACTAGTAGAAGGTAAAATAAC-TGGAATTAAACCTTTTGGTGTG 1262304

Query:    2274 CTGCTCTACATAACCG-TCTCCTCTATAAGAGAAATACTTGCATCGAATTATACGCAAAA 2332
                |  |  |  |||  | ||||  |     |  | ||| |   | | | |||  | |||||
Sbjct: 1262305 TTTGTTGATTTAAATGGTCTCAGCGCCTTGTTACATA-TCAAA-CAAGTTAG-C-CAAAA 1262360

Query:    2333 TCTTCTCATTTCTCATCTTTTCTTTACAGCCTTT-A-CCTGTTAAAACAATTAAAGCTAA 2390
                 |||  ||  |  |||| |     | || |||| | |||| | ||||||||||||||| 
Sbjct: 1262361 A-TTC--AT--CGAATCTCTAGAAAA-AGTCTTTCAACCTGGTCAAACAATTAAAGCTAT 1262414

Query:    2391 ATTATGATCCCCCTGG-TCAAA-TATAGGACTAAAGTTTGATTTTTGAATAAACTCCTTA 2448
               | | | |||  | ||| ||||  || ||| | |  |  | |||| | |  | |  |||||
Sbjct: 1262415 AGT-T-ATCGACTTGGATCAAGGTAAAGGTCGAGTGGCT-ATTTCT-ACCAGAG-CCTTA 1262469

 Score = 141 (27.2 bits), Expect = 0.026, Sum P(3) = 0.025
 Identities = 45/60 (75%), Positives = 45/60 (75%), Strand = Plus / Plus

Query:    789 CCCTTCGGGTGA--GC-AGTCGCTACAAGTCGGGGAACCCGCCCAACGCGCTG-CTCACC 844
              |||||||   ||  || | | |||||||| ||||||||||| |||||||  || || | |
Sbjct: 205479 CCCTTCGTAGGAACGCCACTTGCTACAAGCCGGGGAACCCGTCCAACGCAGTGGCTGAAC 205538

 Score = 138 (26.8 bits), Expect = 8.2e-17, Sum P(3) = 8.2e-17
 Identities = 68/105 (64%), Positives = 68/105 (64%), Strand = Plus / Plus

Query:     608 GTTAAATTCAATTACTTGAAAATCC-ATTTTATTAGCTACCTCTCTAAACGTTTTTTCAA 666
               ||||||||||||  ||| |  ||   |||| ||| |||   ||  ||  | | |||| ||
Sbjct: 4561253 GTTAAATTCAATGGCTTTATCATAAGATTTAATT-GCTTGATCA-TA--C-TGTTTTAAA 4561307

Query:     667 TTAGTTCAATACTTTCCTTTGTGAATAC-AGACTTACG-ATACTT 709
               ||| |  ||  ||| || |   | || | ||||||  | ||| ||
Sbjct: 4561308 TTACTAAAAG-CTTCCCCTCTAGCATTCCAGACTTCTGGATAATT 4561351

 Score = 137 (26.6 bits), Expect = 9.0e-17, Sum P(3) = 9.0e-17
 Identities = 91/145 (62%), Positives = 91/145 (62%), Strand = Plus / Plus

Query:     536 AGCATTAACAATTTGAGAGATGGATAACTTGGGGGGATATTCAATAAGCGC-GTGAACAT 594
               ||||| || |||||||||||   |||||| | |   | ||| |||    |  || |||| 
Sbjct: 4820178 AGCATAAAAAATTTGAGAGA---ATAACTAGAGTT-A-ATTGAATGCTTGAAGTTAACA- 4820231

Query:     595 GGTTGTCTTCACCGT-TA-AATTC-AATTACTTGAAAATCCATT-TTA-TTAGCTACC-T 648
                ||||  ||    |  || || || ||||  |||||||   ||| ||| |||  |||  |
Sbjct: 4820232 -GTTGATTTGGGTGGATATAAATCTAATTTATTGAAAAAG-ATTCTTAATTAA-TACTAT 4820288

Query:     649 CTCTAA-ACGTTTTTTCAATTAGTT 672
                | | | |    ||  |||||| ||
Sbjct: 4820289 TTTTTACAAAAGTTAACAATTATTT 4820313

 Score = 136 (26.5 bits), Expect = 3.4e-20, Sum P(3) = 3.4e-20
 Identities = 260/470 (55%), Positives = 260/470 (55%), Strand = Plus / Plus

Query:    1105 CAACAATCTGTTGCTGATTTAGGAGTTGCTTACAAAAACTTTTTTGATTCACTCAAGGGT 1164
               || ||| |||||||||||| |  | ||| ||  | |  |||| || ||  || |||   |
Sbjct: 6228290 CAGCAA-CTGTTGCTGATTCAATACTTGTTTTGACAC-CTTTGTTAATCAAC-CAACCAT 6228346

Query:    1165 AAACGCAAAGGCAAAAAAGTAGGCACACCCAAGTTT-A--AGAA-GAAGA-CAAGTAAAC 1219
                || |   ||  |||||  |     ||   |  |   |  ||   | ||| |  ||||| 
Sbjct: 6228347 CAAAGGGCAGAGAAAAAGATCCTTGCAAAGATTTCACACCAGCGTGCAGAGCGTGTAAAT 6228406

Query:    1220 AATCAGCCAGATTTAGAATTGGTGGTTTTTCGAT-TAAAGGAGATGAAGTCTACCTAGCT 1278
                |||   || | | | | ||  || | |||| |  | |||    ||   ||    |  | 
Sbjct: 6228407 CATCGATCAAAATCACATTTTCTGCTGTTTCTAAGTTAAGTTTCTGC--TCAGAATCCCC 6228464

Query:    1279 AAAATTGGCAACGTCAAGCCTCTAAAGTCAAGAC-AAT--TACCATCTGCACCAAG--TA 1333
               | |  |   |||  || |  |  ||||| | ||| ||   || | | ||| ||||   ||
Sbjct: 6228465 AGAGCTA--AACA-CATGA-TA-AAAGTTAGGACTAACACTAACTTTTGCCCCAATACTA 6228519

Query:    1334 GTGTAACA-GTCATTAAAGACTGTGCTAATCGTTATTTTCTTAGCTTTGTC-GTAGAAGT 1391
               |  | ||  |||  |  ||  | |  ||| | || ||| |    | |   | || |||| 
Sbjct: 6228520 GCATTACCTGTCGGTTGAGTAT-T--TAACC-TT-TTTGCAGTCCCTGCACTGT-GAAGA 6228573

Query:    1392 AGAGCCTATTCA-ATCTGAAG--CTAAAAA--CCAAA--GC-ATT-GGTATTGATTTAGG 1442
               | ||||| || | ||   |    |||  ||  |||    || | | ||| |   || |  
Sbjct: 6228574 A-AGCCTGTTAAGATTCCATTTTCTATTAATGCCACCTTGCGAGTAGGTGTACCTTCACC 6228632

Query:    1443 AATCAAAACTTT-TGCGGTTATGA-GTAATGGAGAAAAAGCAATCAGTCCCGATTACTCA 1500
               | |||||||||| |||   ||||  |  | |||   | |||| ||| ||   |  ||  |
Sbjct: 6228633 A-TCAAAACTTTCTGCACCTATGTTGGCA-GGATGTAGAGCA-TCA-TCATAA--ACAGA 6228686

Query:    1501 -AAGAAAGACCGCAA-AATTCGCAAACTGCAA-CG-CAAGA-TAGC-AAG 1544
                || |||| | | |  |||| ||  ||   || |  || || |||  |||
Sbjct: 6228687 TAATAAAGGC-GAAGCAATTTGCTTACCTAAATCATCAGGAGTAGATAAG 6228735

 Score = 135 (26.3 bits), Expect = 3.8e-17, Sum P(4) = 3.8e-17
 Identities = 39/51 (76%), Positives = 39/51 (76%), Strand = Plus / Plus

Query:    1429 GGTATTGATTTAGGAATCAAAACTTTT-GCGGTTATGAGTAATGGAGAAAA 1478
               ||||||||||||||  | ||||| ||| || ||| ||  | | || |||||
Sbjct: 3314942 GGTATTGATTTAGGGCT-AAAACATTTCGCTGTTGTGTCTGACGGTGAAAA 3314991

 Score = 135 (26.3 bits), Expect = 0.0028, Sum P(2) = 0.0028
 Identities = 155/276 (56%), Positives = 155/276 (56%), Strand = Plus / Plus

Query:    2189 AGGATATTGCTTCTAGAACCGCATA-ACCTAGTCATAATAAATTGC-AGCTTCATGTTGA 2246
               || ||||  || |||||   | |   | |  | | ||| ||   |  |||   || ||| 
Sbjct: 2355953 AGAATATCACTACTAGATT-GAAGCGATCGCGCCTTAA-AAGCAGATAGCAA-AT-TTGG 2356008

Query:    2247 TAAGCTTTCATGCA-ATTATTTGCGTTGCTGCTCTAC-ATAACCGTCTCCTCT-A-TAAG 2302
               |||  |   || |  | |  || |  | || |||| | || |  |||     | | |  |
Sbjct: 2356009 TAAT-TGAAATTCCCACTGCTTACTCTCCT-CTCTCCCATTATTGTCAATAGTGAGTCTG 2356066

Query:    2303 AGAAATACTTGCATCGA-ATTATACGCA-A-AATCTTCTCATTTCTCAT-CTTTTCTTTA 2358
               |  || | | | ||| | || |||| || | || |  ||| |   |||| |   ||   |
Sbjct: 2356067 ATTAA-AGTAGAATCTATATCATACCCAGATAAGCG-CTCTTCATTCATACCCATCAACA 2356124

Query:    2359 CAGCCTTTACCTGTTAAAACAATTAAAGCTAAATTA-TGATCCCCCTGGTCAAATATAGG 2417
               |||   |  |  ||  | |  ||||    |  |||| || | |   ||  ||  ||||||
Sbjct: 2356125 CAGAGATATCACGTCCATA--ATTAGTT-TCTATTAATGGTTCA--TGAGCA--TATAGG 2356177

Query:    2418 ACTAAAGTTTGATTTTTGAATAAACTCCTTACCTAT 2453
               | |    ||||||||||||||||  ||| ||| | |
Sbjct: 2356178 AATCCTATTTGATTTTTGAATAAGTTCCGTACATCT 2356213

 Score = 133 (26.0 bits), Expect = 1.4e-18, Sum P(4) = 1.4e-18
 Identities = 83/137 (60%), Positives = 83/137 (60%), Strand = Plus / Plus

Query:     538 CATTAACAATTTGAGAGATGGATAACTTGGGGGGATATTCAATAAG-CGCGTGAACATGG 596
               ||||||  ||  | || |||||| |   || || | ||||  | || |  || || ||  
Sbjct: 3919017 CATTAA--ATAAGTGATATGGATCA---GGAGGCA-ATTCTTTTAGGCTGGTCAATATAC 3919070

Query:     597 TTG--TCTTCACCGTTAAATTCAATTACTTGAAAATCCATTTTATTAGCTACCTCTCTAA 654
               |    | || |||||||||||| |||  || | || | |  | || |   || | |||  
Sbjct: 3919071 TACAATTTTTACCGTTAAATTCCATTTGTTCATAACCAACCTGATCAATAACTTGTCTGG 3919130

Query:     655 --ACGTTTTTTCAATTA 669
                 | |||| |  ||| |
Sbjct: 3919131 CTATGTTTGTAAAATCA 3919147

 Score = 133 (26.0 bits), Expect = 4.6e-17, Sum P(4) = 4.6e-17
 Identities = 67/107 (62%), Positives = 67/107 (62%), Strand = Plus / Plus

Query:    1049 AAGCTAAAAAGA-CTGATGAGCGTTCATGGTTATCTGA-TGTTTCTAATATCCCTTTACA 1106
               || || |||| | | || ||   ||  |||||| |||| ||||  ||       ||||||
Sbjct: 3314456 AATCTCAAAAAAGCAGAAGATACTTGTTGGTTAGCTGACTGTTA-TAGCCAAGTTTTACA 3314514

Query:    1107 A-CAATCTGTTGCTGATT-TAGGAGTTGCTTACAAAAACTTTTTTGA 1151
               | | | |     |||| | ||      || ||||| |||||||||||
Sbjct: 3314515 AGCTA-CAACA-CTGAATCTAACCACAGCGTACAAGAACTTTTTTGA 3314559

 Score = 133 (26.0 bits), Expect = 0.049, Sum P(3) = 0.048
 Identities = 35/44 (79%), Positives = 35/44 (79%), Strand = Plus / Plus

Query:     802 CAGTCGCTACAAGTCGGGGAACCCGCCCAACGCGCTG-CTCACC 844
               || | ||||||||||||  || |||||||||||  || ||| ||
Sbjct: 1165342 CACTTGCTACAAGTCGGCAAAGCCGCCCAACGCAGTGGCTCCCC 1165385

 Score = 131 (25.7 bits), Expect = 5.6e-17, Sum P(4) = 5.6e-17
 Identities = 187/340 (55%), Positives = 187/340 (55%), Strand = Plus / Plus

Query:    1164 TAAACGCAAAGGCAAAAAAGTAGGCACACC-CAAGTTTAAGAAGAAGA-CA-AGTAAACA 1220
               ||||||||||| |||   |||| | |||   ||||   || || || | || || |   |
Sbjct: 3757777 TAAACGCAAAGTCAAGTTAGTACGGACAAAACAAGAA-AA-AACAATATCAGAGCATCAA 3757834

Query:    1221 ATCAGCCAGATTTAGAATTGGTGGTTTT-TCGATTAAAGGAGATGAAGTCTACCTAGCTA 1279
               || | |  ||  |  ||  |||||   | | ||  |||  | |  |||      ||    
Sbjct: 3757835 ATAATCTGGAACTCAAAA-GGTGGGAATATAGAGCAAAATATAGCAAGAGATTTTATTGG 3757893

Query:    1280 AA-ATTGGCAACGTCAAGCCTCTAA-AGTCAAGACAATTACCATCTGCACCA-AGTAGTG 1336
               || |   |||  || || |   ||| | | || | ||| || ||    |  | || ||| 
Sbjct: 3757894 AAGAGATGCA--GT-AA-CTAATAATAATAAAAA-AATCACTATTAAAAATAGAGAAGTA 3757948

Query:    1337 TAAC--AGTCATTA-AAGACTGTGCTAATCGTT-ATTTTCTTAGCTTTGTCGTAGAAGTA 1392
                ||   |  | | | || | | | | ||   || ||  | ||||     |  |||  | |
Sbjct: 3757949 GAAGTTAACCCTAACAATATTATTCAAACATTTGATGATTTTAGAGACATTTTAGC-GCA 3758007

Query:    1393 GAGCCTA-TTCAA---TCTGAAGCTAAA-AACCAAAGCATTGGTATTGATTTAGGAATCA 1447
                ||  || |||||   ||||| ||   | || |||  | |  || |||    |||||| |
Sbjct: 3758008 AAGTATAATTCAAAGCTCTGATGCGCTAGAAGCAATACGTGAGT-TTGCAC-AGGAATTA 3758065

Query:    1448 AAACTTTTGCGGTTATG-AGTAATGGAGAAAAAGCAATCA 1486
               |  ||   ||  ||| | | | |   ||||  |  |||||
Sbjct: 3758066 A--CTGA-GCAATTACGCAATCAACCAGAAGTAA-AATCA 3758101

 Score = 128 (25.3 bits), Expect = 0.0, Sum P(2) = 0.0
 Identities = 44/64 (68%), Positives = 44/64 (68%), Strand = Plus / Plus

Query:      11 TTCTAAGGCTTGAGCGACAGCAGCGATCGCTTGATTTTTCGCCTCGGTAGACAGCATCGC 70
               || ||| |||||| |   | ||||||||||| | | |   | || | ||||||| | |||
Sbjct: 1029244 TTGTAATGCTTGATCATAATCAGCGATCGCT-GCTGTAAAGTCT-GCTAGACAGTAACGC 1029301

Query:      71 CAAT 74
                 ||
Sbjct: 1029302 GCAT 1029305

 Score = 126 (25.0 bits), Expect = 0.0, Sum P(2) = 0.0
 Identities = 32/39 (82%), Positives = 32/39 (82%), Strand = Plus / Plus

Query:       4 TTGCAGATTCTAAGGCTTGAGCGACAGCAGCGATCGCTT 42
               ||| | |||||||||||||| | | ||  ||||||||||
Sbjct: 1568581 TTGTA-ATTCTAAGGCTTGATCAAAAGAGGCGATCGCTT 1568618

 Score = 126 (25.0 bits), Expect = 9.3e-20, Sum P(3) = 9.3e-20
 Identities = 100/168 (59%), Positives = 100/168 (59%), Strand = Plus / Plus

Query:    2234 AGCTTCATGTTGATA-AGCTTT-CATGCAATTATTTGCGTTGCTGC-TCTACATAACCGT 2290
               ||||| |  || | | |||    || ||||||||||| ||  | || || | ||||| ||
Sbjct: 5367964 AGCTTAAAATTAAAATAGCCCAGCA-GCAATTATTTGAGTCACAGCATC-AGATAACTGT 5368021

Query:    2291 CTCCTCTAT-AAGA--GAAATACTTGCATCGAATTATACGCAAAATCTTCTCATT-TCTC 2346
                | ||  || ||||  | || |    ||  ||   || |||||  | ||  ||   | | 
Sbjct: 5368022 -TGCTGAATTAAGATTGCAACAAGAACAG-GAGCGAT-CGCAAC-TGTTGGCAGAATATT 5368077

Query:    2347 ATCTTTTCTTTACAGCCTTTACCT-GTTAAAACAATTAAAGCTAAATT 2393
                 | || || ||  || || |||  | ||    || | |||| || ||
Sbjct: 5368078 TACGTT-CTCTAG-GCGTTGACCCAGATAGTTTAAGTTAAGC-AAGTT 5368122

 Score = 125 (24.8 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
 Identities = 133/232 (57%), Positives = 133/232 (57%), Strand = Plus / Plus

Query:    2221 CATAATAAATT-GCAGCTTCATGTTGATAAGCTTTCATGCAATTATTTGCGTTGCTGCTC 2279
               | |||| |||  ||||  ||   |||||||   || ||| | || | ||  || | ||| 
Sbjct: 3408455 CCTAATCAATCAGCAG--TCGA-TTGATAAAAGTT-ATGTAGTT-TCTGAATTACCGCTA 3408509

Query:    2280 TACATAACCGTCTCCTCTATAAGAGAAATACTTGCATCGA-ATTA-TACGCAAAATCTTC 2337
               | | ||||  | || | |||||  ||   | ||  || || || | |   |||  | || 
Sbjct: 3408510 T-CTTAACTTT-TC-TGTATAACGGAGC-AGTTA-AT-GACATGAGTGTTCAAT-TGTTG 3408562

Query:    2338 TCATTTCTCATCTTTTCTTTACAGCCTTTAC-CTGTTAAAACAATTAAAG-CTA-AATT- 2393
               | | | |||    |||||   | |  |  |  ||    | || |||     ||  |||| 
Sbjct: 3408563 TGAAT-CTCCCAGTTTCTAGCCTGG-TAGAGGCTCAATATACTATTTCCTACTTTAATTT 3408620

Query:    2394 ATG-A-TCCCCCTGGTCAAATATAGGACTAAAGTTTGATTTTTGAA-TAAAC 2442
               ||  | |     |  ||    |||||||| |   |||||||||||| || ||
Sbjct: 3408621 ATCTAGTTTGTTTTATCTGCCATAGGACTCATACTTGATTTTTGAAATATAC 3408672

 Score = 125 (24.8 bits), Expect = 9.0, Sum P(2) = 1.00
 Identities = 55/88 (62%), Positives = 55/88 (62%), Strand = Plus / Plus

Query:    1893 AGTGTTGTGCTTAAACTGCAATACTGAACACGACAGAGATGAGAACGCATCCCAAAATAT 1952
               ||| || | || |  | |||||| |  |  | |   || | ||| || || |  ||||||
Sbjct: 1510146 AGTCTT-TCCTCATCCCGCAATAGTTCAG-CTATTCAGTTTAGATCGTATTCTTAAATAT 1510203

Query:    1953 AAAAATGGTCGGCATGGGGCATCGGCAC 1980
               ||||| || || |||  |  | || | |
Sbjct: 1510204 AAAAAAGGGCG-CATCAGTGAGCGCCGC 1510230

  Minus Strand HSPs:

 Score = 2220 (339.1 bits), Expect = 9.8e-95, Sum P(2) = 9.8e-95
 Identities = 624/825 (75%), Positives = 624/825 (75%), Strand = Minus / Plus

Query:    2081 TTTTGACATACTCACCGACCTAA-AGGTGCGGTGATTCTTGACGCTTCACCGGA-CTGTG 2024
               | ||||||||||||||||  |   |  | ||||||||||||||  ||||| | | || ||
Sbjct: 1889550 TGTTGACATACTCACCGAGATTCTACCT-CGGTGATTCTTGACAGTTCACAGTAACT-TG 1889607

Query:    2023 CTGGCGAACCAGTCTTACCTGTC-CTCTGCGCCCGTTTAAGGTCGTGCCGATGCCCCATG 1965
               ||  ||||  ||||| ||  ||| |||   ||||||||||||||||||||||||||||||
Sbjct: 1889608 CTACCGAAGTAGTCTGACA-GTCACTCCCTGCCCGTTTAAGGTCGTGCCGATGCCCCATG 1889666

Query:    1964 CCGACCATTTTTATATTTTGGGATGCGTTCTCATCTCTGTCGTGTTCAGTATTGCAGTTT 1905
               |||||||||| |||||||   |||||||| ||||| || || || ||||||  |||  ||
Sbjct: 1889667 CCGACCATTTCTATATTTCTAGATGCGTTTTCATCCCTTTCTTGCTCAGTACCGCAACTT 1889726

Query:    1904 AAGCACAACACTGAGCGCACAGATAAATCAATCTTGCCCCACCTATACCCACAACAAGAA 1845
               || || |  | |||||| ||||| |  || || || ||||| | | | |||||||| |||
Sbjct: 1889727 AAACAAAGTATTGAGCGAACAGAAAGGTCGATTTTACCCCAACGAAAACCACAACATGAA 1889786

Query:    1844 CAAGTTTGGCTAGTAGGTTCCCATCTA-CTAATGACCCTGAAATCCCGATTAAGTTTTTC 1786
               ||  ||||||| || || | ||||||| ||| | || |  ||||| ||  ||| ||||||
Sbjct: 1889787 CATATTTGGCTTGTTGGCTGCCATCTATCTATT-ACGCGAAAATCACGGCTAAATTTTTC 1889845

Query:    1785 AGATTTA-CTCTCACAAAATACCCGAAACTCTCTCCATCCCTGCAAGCTAATTATTCTTG 1727
                |||||| || |||||||     | |||||||| ||| || ||||| ||||| |  || |
Sbjct: 1889846 TGATTTAGCT-TCACAAAGGTTTCTAAACTCTCGCCACCCTTGCAAACTAATCACCCTAG 1889904

Query:    1726 CTAACTTACGATTCTTGACCATTCCTGACACATTCAAATCTTCCAAAACAATAGCTTGGT 1667
                ||   |||  || || |||||||||||||| || |||||||||||||||||  ||||||
Sbjct: 1889905 ATAGTCTACTGTTTTTAACCATTCCTGACACGTTTAAATCTTCCAAAACAATTACTTGGT 1889964

Query:    1666 TTTCACTAACTACTTTGGTTGAAAGTTTGTGAAGGAAGTCTTTTCGGGTATCCGCAATTT 1607
               | ||  ||| || ||||||||| |  || || | ||||||||| |  ||||| |||||||
Sbjct: 1889965 TATCGTTAATTATTTTGGTTGACAACTTATGTAAGAAGTCTTTCCTAGTATCAGCAATTT 1890024

Query:    1606 TGTTGTGTTGCTTGGCGATTCTTAA-GCGGGT-TCGTTCACGACGCTTAGACCCCTTCTG 1549
                ||| ||  | || || ||| |||| ||| || | |||  |  |  || ||  | || ||
Sbjct: 1890025 GGTTATGCAGTTTAGCAATT-TTAACGCGAGTATTGTTT-CTCCTTTTTGAATCTTTTTG 1890082

Query:    1548 TTGTCTTGCTATCTTGCGTTGCAGTTTGCGAATTTTGCGGTCTTTCTTTGAGTAATCGGG 1489
               ||||| |||||  ||   ||| ||||| |||||||||||||| |  |||||||| || ||
Sbjct: 1890083 TTGTCGTGCTAATTTCTTTTGTAGTTTACGAATTTTGCGGTCATGTTTTGAGTAGTCAGG 1890142

Query:    1488 ACTGATTGCTTTTTCTCCATTACTCATAACCGCAAAAGTTTTGATTCCTAAATCAATACC 1429
               ||| |  |||||||||||||||||||| || ||||||||||| |  || |||||||||||
Sbjct: 1890143 ACTTAACGCTTTTTCTCCATTACTCATGACAGCAAAAGTTTTTAGACCCAAATCAATACC 1890202

Query:    1428 AATGCTTTGGTTTTTAGCTTCAGATTGAATAGGCT-CTACTTCTACGACAAAGCTAAGAA 1370
                || |||||||| |||||   || | | || || | | |||||||| ||||| |||||||
Sbjct: 1890203 TATACTTTGGTTATTAGCAATAG-TAGTATTGGGTTCAACTTCTACTACAAAACTAAGAA 1890261

Query:    1369 AATAACGATTAGCACAGTCTTTAATGACTGTTACACTACTTGGTGCAGATGGTAATTGTC 1310
               |||| || |||||||| |||||||| || || ||   ||| ||| |||||||||| | ||
Sbjct: 1890262 AATATCGGTTAGCACAATCTTTAATCACCGTGACTGAACTAGGTTCAGATGGTAACTCTC 1890321

Query:    1309 TTGACTTTAGAGGCTTGACGTTGCCAATTTTAGCTAGGTAGACTT 1265
               |||||   |  || ||||  || |||||||| |||| ||| ||||
Sbjct: 1890322 TTGACCAAATTGGTTTGATATTTCCAATTTTGGCTAAGTAAACTT 1890366

 Score = 226 (40.0 bits), Expect = 0.060, P = 0.059
 Identities = 204/359 (56%), Positives = 204/359 (56%), Strand = Minus / Plus

Query:    1735 TTATTCTTGCTAA--CTTACGATTCTTGACCATTCC-TGACACATTCAAATCTTCCAAAA 1679
               ||  ||||||| |  ||| | |      | ||| || ||| || || | || ||| || |
Sbjct: 5576434 TTCATCTTGCTTAGGCTTGCAACGAGCCATCATACCCTGA-ACGTTGAGATTTTCAAATA 5576492

Query:    1678 CAAT-AGCTTGGTTTTCACTAACTACTTTGGTTGAAAGTTTGTGAAGGA-AGTCTTTTCG 1621
               |||| || | |  |  |  ||||||  ||    |  | |||   |  || | || | || 
Sbjct: 5576493 CAATCAGGTCGAATCGCT-TAACTAAATTATGAGCTATTTTCC-ATTGATAATCCTCTCT 5576550

Query:    1620 GGTATCCGCAATTTTGTTGTGTTGCTTGGCGATTCT-TAAGCGGGTTCGTTCACGACGCT 1562
                  ||  | || ||| |  | | |||  || |||   | |   | ||  ||  |||||  
Sbjct: 5576551 TTGATTGGTAACTTTCTGTTCTAGCTGCGCTATTTGCTGATATGCTTT-TTGGCGACGAC 5576609

Query:    1561 TAGACCCCTTCTGTTGTCTTGCTATCTTGCGTTGCAGTTT-G-CGA-ATT--TTGCGGTC 1507
                 || ||  |      | || | || | ||    |||||  | ||  ||   ||||| ||
Sbjct: 5576610 GGGAACC--TAAAAC-T-TTACGAT-TCGCCGCCCAGTTAAGACGCGATCGCTTGCGTTC 5576664

Query:    1506 TTTCT--TTGAGTAATCG-GGACTGATTGCTTTTTCTCCATTACTCATA-ACCGCAAAAG 1451
                 |||  |||   ||||| ||| ||       |||| ||| | || | | |   ||    
Sbjct: 5576665 CATCTGCTTGTAAAATCGAGGATTGGCAATAGTTTCACCAGTGCTTAGAGATATCAGCT- 5576723

Query:    1450 TTTTGATTCCTAAATCAA-TACCAATGCT-TTGGTTTTTAGCTTCAGATTGAATAGGCT 1394
               |||| ||||||||||| | | |||| ||| || || ||| |||   |||  |  || ||
Sbjct: 5576724 TTTTAATTCCTAAATCCACTCCCAACGCTGTTTGTATTT-GCTGG-GATGCAGAAGCCT 5576780

 Score = 211 (37.7 bits), Expect = 6.4, Sum P(2) = 1.00
 Identities = 189/329 (57%), Positives = 189/329 (57%), Strand = Minus / Plus

Query:   1101 AGGGATATTAGAAACATCAGATAACCATGAACGCTCATCA--GTCTTTTTAGCTTGCGTA 1044
              ||  |||   | || || |  | ||||  ||| |||  ||  || ||   |  |     |
Sbjct: 472835 AGTCATACCCGGAATAT-ACTTCACCA--AACACTCCGCAACGTGTTGAAAAGTATTAAA 472891

Query:   1043 ATCACCAGCTTTTGCAAGT-CGTTGTTACTAGGA-AGCTTTT-CGGACTGTTTGCAAACA 987
              |||| ||  |    |||   | |||| | | ||| |  | || ||||| |||||   | |
Sbjct: 472892 ATCATCATTTAACACAATCACCTTGTAATTGGGATAAGTCTTGCGGACAGTTTGATTAGA 472951

Query:    986 GCCAGAGCATCA-TTCCAGACTACGC-GAACGCAAC-C--AAACAACTGCGCTAACAGTT 932
               || |  ||  | || |||     || | || ||   |  ||||| ||   | || ||||
Sbjct: 472952 -CC-GTTCAGGAGTTACAGTTGGTGCTGTACTCATGGCGTAAACATCTAT-CGAA-AGTT 473007

Query:    931 GCTTTTGTTGGTCTGTCGGGTAGAACCG-GAATTGATATCTGGCTTTCATTGATAATGTA 873
                || |     |    | | || | | | ||| |  ||     ||   | | | ||  ||
Sbjct: 473008 --TTGTAACCATAGAACAGTTA-ACCAGAGAAATTTTACAAAACTAA-ACT-ACAAC-TA 473061

Query:    872 TAATTGGTCTGTAGAA-GT-ATTATACATTGGTGAG-CAGCGCGTTGGGCGGGTTCCCCG 816
               ||| | |  ||  |  || | |   || ||||||| ||| |||||||| ||||||||||
Sbjct: 473062 -AATAGTTTAGTCCATTGTTAGTGGTCAGTGGTGAGGCAGTGCGTTGGGAGGGTTCCCCG 473120

Query:    815 ACTTGTAGCGACTGC-TCACCCGAAGGGT 788
              ||||||||| ||||| |    || || ||
Sbjct: 473121 ACTTGTAGCAACTGCCTGTAGCGCAGCGT 473149

 Score = 178 (32.8 bits), Expect = 3.9, P = 0.98
 Identities = 370/689 (53%), Positives = 370/689 (53%), Strand = Minus / Plus

Query:    1742 AAGCTAATTATTCTTGCTAACTTACGATTCTTGACCATTCCT-G-ACACAT-TCAAATCT 1686
               ||||   |||  || | |  ||   ||| || ||  |||  | | ||| || |||| | |
Sbjct: 6142190 AAGCCTTTTAC-CTCGATCTCTGGTGATGCT-GAT-ATTATTTGTACAAATGTCAACT-T 6142245

Query:    1685 TC-CAAAACAA-TAGCTTGGTTTTCACTA-ACTACTTTG-GTTGAAAGTTTGTGA-AGGA 1631
               || | | ||   | |  | |  || |||| |  |||||  ||||| | ||  ||  || |
Sbjct: 6142246 TCACTATACTGGTCGAGTTGACTT-ACTAGAAGACTTTACGTTGACAATTCCTGGTAGTA 6142304

Query:    1630 A-GTCTTTTCGGGTATCCGCAATTTTGTTGTGTTGCTTGGCGATTCTTAAGCGGGTTCGT 1572
               | |||  | |   |||| |||| |  |   ||| | |    |   | |   |   ||  |
Sbjct: 6142305 AAGTCACTGCTATTATCGGCAAATCGGGA-TGTGG-TAAAAGTACCGTCGCCAAATTAAT 6142362

Query:    1571 TCACGACGCTTAGACCCCTTCTGTTGTCTTGCTATCTTGCG-TTGCAGTTTGCGAATTTT 1513
               | || | | ||| |  | | |||   ||| |  || ||  | ||| | | |   |  || 
Sbjct: 6142363 T-ACTA-GTTTATATAC-T-CTGCAATCTGGGAATATTCGGATTGGACTATATAACCTTC 6142418

Query:    1512 GCGGTCTTTCT-TTGAGTAATCGGGACTGATTGCTTTTTCTCCATTACTCATAACCGCAA 1454
                 | | || |  |||| |  |   | | |   |   ||| |   || ||||  |  ||  
Sbjct: 6142419 AAGATATTGCCCTTGATTGTTTACGCCAGCAAGTAGTTT-TAG-TTCCTCAAGAT-GCCC 6142475

Query:    1453 AAGTTTTGATTCCTAAATCAATACC-AATGCTTTGGTTTTTAGCTTCAGATT-G--A-AT 1399
               |  ||| || || |   | | || | ||  |||| ||||   |||    ||| |  | ||
Sbjct: 6142476 ATTTTTGGAGTCGTTC-T-ATTATCGAAAACTTTCGTTTAG-GCTCGCCATTTGTTACAT 6142532

Query:    1398 AGGCTCTACTTCTACGACAAAGCTAAGAAAATA-A-C-GATTAGCACAGTCTTTAATGAC 1342
                 |  | | || |  ||    |  |||    |  | | ||| ||   | |  |  |  ||
Sbjct: 6142533 TTGAGCAAATTGTTAGAGCTTGTCAAGTTGCTGGAGCCGATGAGTTTATTGGTAGACTAC 6142592

Query:    1341 -TGTTACAC-T-ACTTGGTGCAGATGGTAATT-GTCTTGACT-TTAGAGGCTTGACGTTG 1287
                || || |  | |   | |    | |  |||| | |   | | ||   || | |||   |
Sbjct: 6142593 CTGATAAATATCAAACGATTTT-AGGAGAATTTGGCGCAAATATTTCTGG-TGGACAACG 6142650

Query:    1286 CCAAT-TTTAGCTAGGTAGACTTCATCTCCTTTAATCGAAAAACCACCAATTCTAAATCT 1228
               |||   |||||| |  ||| ||  | ||  | | | |  | ||||||||||||||| | |
Sbjct: 6142651 CCAGCGTTTAGCGA--TAG-CTAGAGCTATTGTTA-C--AGAACCACCAATTCTAATTTT 6142704

Query:    1227 GGCTGATTGTTTACTTGTCTTCTTCTTAAACTTGGGTGT-GCCTACTTTTTTGCCTTTGC 1169
               || ||| | |  ||| ||   |||  |  | | | |||  ||| |  |||| |  |    
Sbjct: 6142705 GGATGAATCT--ACTGGTGGACTTGATCCAGT-GAGTGAAGCCCAAGTTTTAGA-TGAAT 6142760

Query:    1168 GTTTAC-CCTTGAGTGAATC-AAAA--A-AGTTTTTGTAAG-CAAC-TCCTAAA-TCAGC 1117
                 |||| || |  |  ||   ||||  | | ||||  | || || | ||| ||| | |  
Sbjct: 6142761 TATTACACCATC-GCCAAGGTAAAACCACAATTTTAATTAGTCACCGTCCCAAAGTAATT 6142819

Query:    1116 AA-CAGATTG-TTGTAAAGGGATATTAGA 1090
               || | |  || ||| |  |   || ||||
Sbjct: 6142820 AATCGGGCTGATTGGATTGTTTTACTAGA 6142848

 Score = 157 (29.6 bits), Expect = 9.0, Sum P(2) = 1.00
 Identities = 81/122 (66%), Positives = 81/122 (66%), Strand = Minus / Plus

Query:    2603 CAATTCAT-CAGACAA-ATTAAA-ATTTC---ACCCACGCTGAGTAATTCTCACTACCTC 2550
               |||||| | |||| |  | |||  || ||   || ||   |  ||| || | | ||| | 
Sbjct: 3540305 CAATTCGTGCAGATATGAGTAATCATCTCTTTACTCATTATTTGTACTTGT-A-TACATG 3540362

Query:    2549 AGT-GG-TTAGACT-AATAGCAGAAAAGCAAAATATAGCAGTCAGT-TTTGGTTTTTGAA 2494
               ||| || ||| | | |||  || ||| || |||||||||||| ||  |||| || | |||
Sbjct: 3540363 AGTAGGCTTAAATTCAATT-CA-AAATGCTAAATATAGCAGTAAGACTTTGCTTGTGGAA 3540420

Query:    2493 TT 2492
                |
Sbjct: 3540421 GT 3540422

 Score = 151 (28.7 bits), Expect = 1.9, Sum P(2) = 0.85
 Identities = 127/221 (57%), Positives = 127/221 (57%), Strand = Minus / Plus

Query:    2442 GTTTATT-CAAAAATCAAACTTTAGTCCTATATTTGAC--CAGGGGG-ATCATAATTTAG 2387
               || |||| || ||||||||   |||||||||||  |    |||  || |   ||||    
Sbjct: 5569993 GTATATTTCAGAAATCAAATACTAGTCCTATATCAGCTTTCAGTCGGTAAGCTAATAACT 5570052

Query:    2386 CTTTAATTGTTTTAACAGGTAAAGGCT-GTAAAGAAAAGATGAGAAA-TGAGAAGATTTT 2329
               | | || | |  |   |  |  | | | || ||||  |  | | ||| ||| || | || 
Sbjct: 5570053 CATCAACTATAATCTGAA-TGGATGATAGTTAAGATGAATTTATAAACTGAAAAAAATTG 5570111

Query:    2328 GCGTATAATTCGATGCAAGTATTTCTCTTAT-AGAGGAGACGGTTATGTAGAG-C-AGCA 2272
                 | || |   | | |||  ||||   || | ||   | |   | || | ||| | |  |
Sbjct: 5570112 TTG-ATGACCAG-T-CAAAAATTTAGTTTGTCAGTTTATATTATAATTTTGAGACTAATA 5570168

Query:    2271 ACGCA-AATAATTGCATGAAAGCTTATCAA--CATGAAGCT 2234
                || | |||| ||| |||||  |||   ||  ||| ||| |
Sbjct: 5570169 TCGTAGAATA-TTGAATGAAC-CTTGAAAATTCATTAAGGT 5570207

 Score = 144 (27.7 bits), Expect = 9.0, Sum P(2) = 1.00
 Identities = 120/198 (60%), Positives = 120/198 (60%), Strand = Minus / Plus

Query:    2347 TGAGAAATGAGAAGATTTTGCGTATAATTC-GATGCAAGTATTTCTCTTATAGAGGAGAC 2289
               | ||||| ||||||||||| || ||| | | |||| |||   | | |  || ||| || |
Sbjct: 4116037 TTAGAAA-GAGAAGATTTTACGAATA-TCCAGATG-AAGACCTCCACA-ATTGAG-AGCC 4116091

Query:    2288 GGTTATGTAGAGCAGCAA-C-G-CAAATAA-TT--GCATGAAAGCTTATCAACATGAAGC 2235
                  | | |||||  | |  | | | | ||| ||  | || ||  || || || | || | 
Sbjct: 4116092 TTATGTATAGAGGTGAAGTCTGGCTAGTAACTTTAGAATAAATTCTAATAAA-A-GA-GA 4116148

Query:    2234 TGCAATT-TATTATGACTAGGTTATGCGGTTCTAGAAGCAATATC-CTCGA-AAGAAAAT 2178
               || || | || | | | ||  | | | | |||  ||     | || || || |||   ||
Sbjct: 4116149 TGAAAATCTACT-TAA-TAA-TCAGGGGTTTCC-GAGATTTTTTCTCTTGATAAGCCTAT 4116204

Query:    2177 TTTTAGGC-ATTCTAGAA 2161
                |  || | ||| |||||
Sbjct: 4116205 CTG-AGCCTATTATAGAA 4116221

 Score = 143 (27.5 bits), Expect = 9.0, Sum P(2) = 1.00
 Identities = 61/94 (64%), Positives = 61/94 (64%), Strand = Minus / Plus

Query:    2406 CCAGGGGGATCATAATTTAGCTTTAATTGTTTTAACAGGTAAAGGCTGTAAAGAAAAGAT 2347
               ||||| | |  |||||||||||| | ||||    | |  || | |||| ||| |  || |
Sbjct: 4352254 CCAGGTGAAAAATAATTTAGCTTGACTTGTGCAGAGAT-TACAAGCTGGAAAAATTAG-T 4352311

Query:    2346 GAGAAATG-AGAAGATTTTGCGTATAATTCGATG 2314
                | |  || |||| |||| ||  | || | || |
Sbjct: 4352312 CA-ATTTGGAGAACATTTGGCACAGAAAT-GAGG 4352343

 Score = 142 (27.4 bits), Expect = 9.8e-95, Sum P(2) = 9.8e-95
 Identities = 44/59 (74%), Positives = 44/59 (74%), Strand = Minus / Plus

Query:     396 AAGAAAAGCCGTCCTAGAACGACGGGGCTTGTAT-CCCATTCTTTTGGTCAATAAGAAT 339
               ||  |||||||||||  || |||||||||| ||  |||| | | ||||| ||| | | |
Sbjct: 5351556 AATCAAAGCCGTCCTTCAAGGACGGGGCTT-TAGACCCAGTTTCTTGGT-AATTATATT 5351612

 Score = 141 (27.2 bits), Expect = 9.0, Sum P(2) = 1.00
 Identities = 41/54 (75%), Positives = 41/54 (75%), Strand = Minus / Plus

Query:    396 AAGAAAAGCCGTCCTAGAACGACGGGGCTTGTAT-CCCATTCTTTTGGTCAATA 344
              ||  |||||||||||  || |||||||||| ||  |||| | | ||||| || |
Sbjct: 360052 AATCAAAGCCGTCCTTCAAGGACGGGGCTT-TAGACCCAGTTTCTTGGTAAAAA 360104

 Score = 137 (26.6 bits), Expect = 9.0, Sum P(2) = 1.00
 Identities = 145/259 (55%), Positives = 145/259 (55%), Strand = Minus / Plus

Query:    1479 TTTTTCTCCATTACTCAT--AACCGCAAAAGTTTTGATTCCTAAATCAATACCAATGCTT 1422
               |||||  | || ||||||  ||   || |    |   | || | |  || || |||    
Sbjct: 4327582 TTTTTTGCAATCACTCATCTAAAATCAGATAAATAACTACCCATAAAAA-ACAAATTAAG 4327640

Query:    1421 TGGTTTTTAGCTTCAGATTGAATAGGCTCTACTTCTACGACAAA-G-CTAAGAA--AATA 1366
                 |  ||| ||   |   | |     || || |||||  ||||| | |||| ||  ||| 
Sbjct: 4327641 GTGCGTTTGGCAAAACCATAACGCACCT-TATTTCTA--ACAAATGACTAATAACCAATG 4327697

Query:    1365 ACGA-TTAGCACAGT-CTTTAATGACTGTTACACTACTTGGTGCAGATGGTAATTGTCTT 1308
               || | || || || | |    ||  || | || |  | |  | || |   |  ||| || 
Sbjct: 4327698 ACTAATTGGC-CACTTCAGCTATTTCTATCACCCGCCCT--T-CATAA--TCCTTGACTA 4327751

Query:    1307 GAC--TTTAGAGGCTTGACGTTGCCAATTTTAGCTAGGTAGACTTCATCTCCTTTAATCG 1250
               ||   |||||||||||   ||| | ||| |||  |   || ||  | | |  | ||  ||
Sbjct: 4327752 GAAAATTTAGAGGCTTCTGGTTACGAATCTTAAATTT-TAAACCGCGTGTT-TCTACCCG 4327809

Query:    1249 AAAAACCACCAATTCTAAA 1231
                |  |  |||| |||||||
Sbjct: 4327810 CATCAAAACCATTTCTAAA 4327828

 Score = 135 (26.3 bits), Expect = 9.0, Sum P(2) = 1.00
 Identities = 35/45 (77%), Positives = 35/45 (77%), Strand = Minus / Plus

Query:    2453 ATAGGTAAGGAGTTTATTCAAAAATCAAACTTTAGTCCTATATTT 2409
               | | ||| |||  ||||||||||||||||    | ||||||||||
Sbjct: 3371901 AGATGTACGGAACTTATTCAAAAATCAAATAGGATTCCTATATTT 3371945

 Score = 135 (26.3 bits), Expect = 9.0, Sum P(2) = 1.00
 Identities = 107/189 (56%), Positives = 107/189 (56%), Strand = Minus / Plus

Query:    2453 ATAGGTAAGGAGTTTATTCAAAAATCAAACTTTAGTCCTATATTTGACCAGGGG--GATC 2396
               | | ||| |||  ||||||||||||||||    | |||||||    |  ||     ||| 
Sbjct: 2076900 AGATGTACGGAACTTATTCAAAAATCAAATAGGATTCCTATAGAATATAAGACTTTGATT 2076959

Query:    2395 ATAATT-TAGCTTTAATTGTTTTAA-C-AGGTAAAGGCTGTAAAGAAAAGATGAGAAATG 2339
                | |   ||  ||||     ||||  | |  ||||   |  |   ||||||  | |||| 
Sbjct: 2076960 TTTACAGTATTTTTACAGAATTTATTCGATCTAAAAAATACACTTAAAAGAC-A-AAATA 2077017

Query:    2338 AGAAGATTTTGCGTATAATTCGATGCA-AGTATTTCTCTTATAGAGGAGACGGTTAT-GT 2281
                || ||||||  || | | |  || |  | ||  | |   | |   ||   |||||| ||
Sbjct: 2077018 CGA-GATTTTCAGTTTTAATGAATACCCAATAAGTATAGGA-ATCCGATTTGGTTATTGT 2077075

Query:    2280 AGA-GCAGC 2273
                |  | |||
Sbjct: 2077076 TGGCGTAGC 2077084

 Score = 133 (26.0 bits), Expect = 9.0, Sum P(2) = 1.00
 Identities = 213/389 (54%), Positives = 213/389 (54%), Strand = Minus / Plus

Query:    2442 GTTTATT-CAAAAATCAAACTTTAGTCCTATA-TT-TGACCAGGGGGATCATAATTTAGC 2386
               || |||| ||||||||||   | ||||||||| || |||  |    | |||  || ||| 
Sbjct: 2864925 GTATATTTCAAAAATCAATTATGAGTCCTATAGTTATGAAAAAAACG-TCAGTATCTAGT 2864983

Query:    2385 --TTTAATT-GTTTTAACA-G-G-TAAAGGCTGTAAAGAAAAGATGAGAAATGAGAAGAT 2332
                 ||| | | ||| ||| | | | ||||   | |    ||     |   |   ||  |||
Sbjct: 2864984 GGTTTTACTAGTTGTAAAAAGAGCTAAAATTTTTGCCTAATCCTAGTTTAGCAAGCTGAT 2865043

Query:    2331 TTTG-CGTATAATTCGAT-GCAAGTATTTCTCTTATAGAGGAGACG-GTTATGTAGAGCA 2275
                |   ||  |||| || | ||   |  || | ||| | |   | || | ||| |  |  |
Sbjct: 2865044 GTAATCGC-TAAT-CGCTTGCTGCTGCTTTTATTAGAAAAT-GCCGTGATAT-TCCACTA 2865099

Query:    2274 GCAACGCAAATAATTGCATGAAAGC--TTATCAACATGAAGCTG--CAATTT-ATTATGA 2220
                || || | ||    |  ||   ||  || ||  | |  ||||   ||||   || | ||
Sbjct: 2865100 TCA-CG-ACATCCAAGGGTGGTCGCGGTTTTCTCC-TCTAGCTAACCAATCCCATAAGGA 2865156

Query:    2219 CTAGGTTATGCGGTTCTAGAAGCAATATCCTCGAAAGAAAATTTTT--AGGCATTCTAG- 2163
                ||  || |    || ||  ||  |  |||  ||||  ||||| ||  | |  |   || 
Sbjct: 2865157 -TATATTTTAATTTT-TATTAGGGACTTCCA-GAAAATAAATTATTCAATGGGTCAGAGC 2865213

Query:    2162 AAGTGTGACCCAAAATAACTTTAACTCAACATACTTCAC-TACAAATCTTACTAGCACTG 2104
               || | ||| | |   ||   ||  |||  | | |||| | | |    | | |   | |||
Sbjct: 2865214 AAATATGATC-ATTGTATTCTTC-CTCCCC-TGCTTCCCCTGCTCTCCCTGCCTCCCCTG 2865270

Query:    2103 GTTACCCAGAGGG-TCGCTAGAATTTTGA 2076
                ||||| | || | | | || | |||| |
Sbjct: 2865271 CTTACC-ACAGTGATTG-TATATTTTTTA 2865297

 Score = 131 (25.7 bits), Expect = 9.0, Sum P(2) = 1.00
 Identities = 71/109 (65%), Positives = 71/109 (65%), Strand = Minus / Plus

Query:    1807 TGAAATCCC-GATTAAGTTTTTCAGATTTACTCTCACAAAATACCCGAAACTCTCTCCA- 1750
               ||||||| | | | ||| ||||  |||||||||||  |||  |||| ||| | | |  | 
Sbjct: 2677830 TGAAATCGCTGGTGAAGATTTTACGATTTACTCTCT-AAATGACCC-AAATT-T-TGAAG 2677885

Query:    1749 TCCCTGCAAGCTAATTATTCTTGCTAACTTACGA-TTCTTGACCATTCC 1702
               || |  || | ||  || | || || ||  || | |||  || | | ||
Sbjct: 2677886 TCACATCAGG-TA--TAGT-TT-CTTACACACAAATTCCCGAACCTGCC 2677929

 Score = 129 (25.4 bits), Expect = 3.7e-94, Sum P(2) = 3.7e-94
 Identities = 49/72 (68%), Positives = 49/72 (68%), Strand = Minus / Plus

Query:     283 TTATCAGATTTTTGCCAGT-AAATGATGGGGGAAATTGGCTCAACCAATGCAGC-AGTTG 226
               ||||   | | ||||| |  |||  || | |||||||||||  |||||||| |  | | |
Sbjct: 4968182 TTATGCCAATATTGCCCGCCAAAAAATTGCGGAAATTGGCTACACCAATGCTGATAATGG 4968241

Query:     225 CATATTAT-CTA 215
               | | || | |||
Sbjct: 4968242 CTT-TTCTGCTA 4968252

 Score = 128 (25.3 bits), Expect = 4.2e-94, Sum P(2) = 4.2e-94
 Identities = 48/70 (68%), Positives = 48/70 (68%), Strand = Minus / Plus

Query:     338 AAAAACCCGATATAGT-TG-GCATTAAAGCAATTTAAATTGATTTGCAGCTGATACCTTA 281
               ||||| | ||||  || |  ||   ||| |||||||||||| |||   ||  | ||  ||
Sbjct: 2602771 AAAAATCTGATAAGGTATCAGCTGCAAATCAATTTAAATTGCTTTAATGCC-A-ACTATA 2602828

Query:     280 TCAGATTTTT 271
               || | |||||
Sbjct: 2602829 TCGGGTTTTT 2602838

 Score = 127 (25.1 bits), Expect = 4.6e-94, Sum P(2) = 4.6e-94
 Identities = 49/71 (69%), Positives = 49/71 (69%), Strand = Minus / Plus

Query:     994 TGCAA-ACAGCCAGAGCATCATTCCAGAC-T-ACGCGAACGCAACCAAACAACTGCG-CT 939
               | ||| ||||||||||| ||||  | ||| | |  | | || | |||||| |||  | ||
Sbjct: 3208206 TTCAACACAGCCAGAGCCTCATCACCGACCTGAATC-AGCGTATCCAAACCACTTTGACT 3208264

Query:     938 AACAGTTGCTT 928
                | ||||  ||
Sbjct: 3208265 GAAAGTTAGTT 3208275

 Score = 126 (25.0 bits), Expect = 6.6, Sum P(2) = 1.00
 Identities = 34/45 (75%), Positives = 34/45 (75%), Strand = Minus / Plus

Query:    2453 ATAGGTAAGGAGTTTATTCAAAAATCAAACTTTAGTCCTATATTT 2409
               | | ||| |||  ||||||||||||||||    | |||||||| |
Sbjct: 5532879 AGATGTACGGAACTTATTCAAAAATCAAATAGGATTCCTATATAT 5532923

 Score = 126 (25.0 bits), Expect = 9.0, Sum P(2) = 1.00
 Identities = 34/45 (75%), Positives = 34/45 (75%), Strand = Minus / Plus

Query:    2453 ATAGGTAAGGAGTTTATTCAAAAATCAAACTTTAGTCCTATATTT 2409
               | | ||| |||  ||||||||||||||||    | ||||||| ||
Sbjct: 2217868 AGATGTACGGAACTTATTCAAAAATCAAATAGGATTCCTATAGTT 2217912

 Score = 124 (24.7 bits), Expect = 6.0e-94, Sum P(3) = 6.0e-94
 Identities = 88/143 (61%), Positives = 88/143 (61%), Strand = Minus / Plus

Query:    2442 GTTTATT-CAAAAATCAAACTTTAGTCCTATAT-T--TGACCAGGGGGATCATAATTT-A 2388
               || |||| ||||||||||   | |||||||||| |  | | |     | | || |||| |
Sbjct: 1848711 GTGTATTTCAAAAATCAAGTATGAGTCCTATATATATTTAACTCATTGCTGATTATTTGA 1848770

Query:    2387 GCTTTAATTGTTTTAACAGGTAAAGGCTGTAAAGAAAAGATGAGAAATGAGAAGATTTTG 2328
               |  ||  |  |||  |||  ||   |  | |||||| ||   |  ||| ||   || |||
Sbjct: 1848771 GAGTTC-TAATTT--ACA--TACCTGA-GCAAAGAATAGGA-ATCAATAAGTC-ATGTTG 1848822

Query:    2327 CGTATAATTCGA-TGCAAGTATT 2306
                  | || | || |||||| |||
Sbjct: 1848823 GCAAAAAAT-GAGTGCAAG-ATT 1848843

 Score = 124 (24.7 bits), Expect = 9.0, Sum P(2) = 1.00
 Identities = 280/524 (53%), Positives = 280/524 (53%), Strand = Minus / Plus

Query:    2556 CTACCTCAGTGGTTAGACTAATAGCAGAAAAGCAAAATATAGCA-GTCAGT-TTTGGTT- 2500
               ||| |  ||| |  | | | || ||||| || |||||  |   | |  | | |||  |  
Sbjct: 4358256 CTAACCAAGTCGA-ACAATTATTGCAGAGAATCAAAAACTCTGATGATAATCTTTCATAA 4358314

Query:    2499 -TTTGAATTGCCTTGCTTGGGATAAGAATAGAGGAAAATGCTTTT-TGATAGG-T-A-AG 2445
                |||| |   |     | |||||||||||| || | ||| |  || | |||   | | | 
Sbjct: 4358315 CTTTGGACAACGGATATAGGGATAAGAATAAAGAACAATTCAATTCTTATACCCTCACAC 4358374

Query:    2444 GAGTTTATTCAAAAATCAAACTTTAGTCCTATATTTGACCAGGGGGATCATAATTTAGCT 2385
                  |  |  |  | | |   |    ||   || ||| |||      |  | ||||||  |
Sbjct: 4358375 CCCTACACCCTTACACCCGCCACAGGTGAAATTTTTCACCTTAATAAGGAAAATTTA--T 4358432

Query:    2384 TTAATTGTTTTAACAGGTAAAGGCTGTAAAGAAAAGATGAGAAATGAGA-AGATTTTG-C 2327
                ||||| | ||   |   | || |||    ||   | | ||  ||  |  | | |||| |
Sbjct: 4358433 GTAATT-TCTTGCGAAACATAG-CTGCT--GATTTGCT-AGTCATCCGGTATAGTTTGGC 4358487

Query:    2326 GTATAATTCGATGCAAGTATTTCTCTTATAGAGGAGACGGTTATGTAGAGCAGCAA-C-G 2269
                     ||| | || | ||| |||  || | |    |   ||| | |    | ||| | |
Sbjct: 4358488 AGGGGTTTCTA-GCTA-TATATCTGCTAAACAACCCAAT-TTAAGCAATTGA-CAATCAG 4358543

Query:    2268 CAAATAATTGCATGAAAGCTTATCAACATGAAGC-TGCAA-TTTA-TTA--TGACTAGGT 2214
               ||||| |  | |  |||   |   ||||| | |  |  || |||  ||   | |  |  |
Sbjct: 4358544 CAAATCACAGAAGCAAAAAATGA-AACATCAGGGGTTTAACTTTTCTTCCTTAAGAAATT 4358602

Query:    2213 TATGC--GGTTCTAGAAGCAATATCCTCGAAAGAAAA-TTT-TTAG--GCATTCTAGAAG 2160
               ||| |  |||| ||     |  | | | |||  | |  ||| ||||  || ||||||  |
Sbjct: 4358603 TATTCTCGGTTTTATCCTTACCAAC-TGGAATCACAGCTTTATTAGTTGC-TTCTAGCGG 4358660

Query:    2159 TGTGACCCAAAATAACTT-TA-ACTCAACA-TACTTCACTACAAATCTT-ACTAGCACTG 2104
                 | |  | |  || ||  |  | | ||   || | |    | ||  || || ||| | |
Sbjct: 4358661 GTTCATGCTAG-TACCTAGTGGAGTTAATGCTAGTGCTGCGCCAACGTTGAC-AGCGCAG 4358718

Query:    2103 GTTACCCA-GAGGGTCGCTAG-AATTT-TGACATACTCACCGAC 2063
               ||| |||| ||  | ||| || ||||| || ||  | || | ||
Sbjct: 4358719 GTT-CCCACGACAG-CGCCAGTAATTTATGTCAATC-CAACAAC 4358759


>ntns01:9:cmr_contig_193 <http://www.tigr.org/tigr-scripts/CMR2/infxview?db=omnium&asmbl_id=193&startbp=1&stopbp=300000&width=1000&height=300> Nostoc sp. PCC 7120  Plasmid pCC7120 alpha Tue Jan 21
            19:52:54 2003
        Length = 408,101

  Minus Strand HSPs:

 Score = 390 (64.6 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
 Identities = 448/798 (56%), Positives = 448/798 (56%), Strand = Minus / Plus

Query:   1949 TTTTGGGATGCGTTCTCATCTCTGTCGTGTTCAGTATTGCAGTTTAAGCACAAC-ACTGA 1891
              ||  | || || || ||||||||||||||    || | |||  ||   || | | ||| |
Sbjct: 150560 TTCCGTGAAGCATTTTCATCTCTGTCGTGGGTTGTTTGGCAACTTGGACAAATCCACTCA 150619

Query:   1890 GCGCACAGATAAATCAATCTTGCCCCACCTATACCCACAACAAGAACAA-GTTTGGCTAG 1832
               || | |  |||||  | |        | |||  || || || |||||| |||| |  | 
Sbjct: 150620 -CGGATACTTAAATTCAGCAAATTATTCTTATGACCGCAGCATGAACAAAGTTTTGA-AC 150677

Query:   1831 TAGGTTCCCATCTACTAA-T-GACCCTGAAATCCCGATTAAGTTTTTCAGATT-TACTCT 1775
              | ||     ||||   || | || |   |  | ||   |    ||| ||| || ||  ||
Sbjct: 150678 TGGGAAAGAATCTGTCAACTTGAACAA-ATTTACCTCCTTCTCTTTCCAGTTTGTAG-CT 150735

Query:   1774 CACAAAATACCCGAAACTCTCTCCATCCCTGCAAGCTAATTATT--CTT-GCTAACTTAC 1718
               |  ||||    | | |   | | |  || |||  | |  ||||  ||| ||||| ||  
Sbjct: 150736 GATGAAATTAA-GCAGCATAC-CAAAACCAGCAT-C-ATGTATTGACTTAGCTAATTTG- 150790

Query:   1717 GATTCTTGACCATTCCTGACACATTCAAATCTTC-CAAA-ACAATAGCTTGGTTTTCACT 1660
              | | | || | |  |||   ||   ||||  ||| ||   || ||   |||||| |||  
Sbjct: 150791 G-TACGTG-CTAGACCTTTAACG--CAAAGGTTCTCAGCTACTATGATTTGGTTATCATC 150846

Query:   1659 AACTA-CTTTGGTTGAAAGTTTGTGAAGGAAGTCTTTTCGGGTATCCGCAATTTTGTTGT 1601
              ||||| |||| || || ||||| || || || |||| ||  || |  |  ||||| | ||
Sbjct: 150847 AACTAACTTTCGT-GAGAGTTTATGGAGAAAATCTTGTCTAGTGTTTGATATTTTTTCGT 150905

Query:   1600 GTTGCTTGGCGATT-CTT-AAGCGGGTT-CGTTCACGACGCTTAGACCCCTTCTGTTGTC 1544
              |    || || | | ||| ||  |  || ||| |  |  | |||||||||||    |  |
Sbjct: 150906 GAACTTTCGCAACTACTTTAATTGCTTTTCGT-CT-GTTG-TTAGACCCCTTGACCTTAC 150962

Query:   1543 TTGCTATCTTGCGTTG-C-AGTTTGC-GAA-TTTTGCGGTCTTTCTT-TGAGTA--ATCG 1491
                | ||       ||| | | || || |   ||||||    |||||  || ||   || |
Sbjct: 150963 GAGATAAAGCTTTTTGTCTAATTCGCAGTCGTTTTGCATATTTTCTGGTGGGTTTGATTG 151022

Query:   1490 GGACTGATTGCTTTTTCTCCATTACTCATAACCGCAAA-AGTT-TTGAT-TCCTAAATCA 1434
              || |  |   ||| |   | | |  |||  | |  | | |||| || |  |  | | || 
Sbjct: 151023 GGTCA-AC--CTTGTAA-CAAGTT-TCACCATCAAACACAGTTATTAAACTGGTTAGTCC 151077

Query:   1433 -ATACCAATGCTTTGGTTTTTAGCTTCAGATTGAA-TAGGCTCTA-CTTCTACGACAAAG 1377
               | | |||| | | | | ||| || |  | |||   |  | |  | |||   |  |||| 
Sbjct: 151078 TAAATCAATTCCT-GATATTTTGCCTT-GCTTGTTGTTTGTTAAATCTTTGGCTTCAAA- 151134

Query:   1376 CTAAGAAAATAACGAT-TAGCACAGTCTTTAAT-GACT--GTTACACT-ACTTGGTGCAG 1322
               |||||    | | |  ||    |  || || | | ||  |  ||| | ||    |  | 
Sbjct: 151135 -TAAGAGTGCAGCAAAATATTT-AC-CTGTACTTGTCTTGGAAACAGTTACAGATTTGAT 151191

Query:   1321 ATGGTAATTGTCTTGACTTTAGAGGCTTGACGTTGCCAATTTTA-GCT-AGGTAGACTTC 1264
               | |  |||   ||   || | || || ||| ||  ||||   | ||| ||||||  || 
Sbjct: 151192 TTTGCTATTAATTTTTTTTGAAAGACT-GACTTTAACAATCCCAAGCTTAGGTAGTTTTA 151250

Query:   1263 ATCTCCTTTAATCGAAAAACCACCAATTCT-A---AATCTGGCTG-ATTGTTTACT-TGT 1210
              | |  ||  | ||   || | | ||| ||| |   |||| || || | ||||||   || 
Sbjct: 151251 AACCACT--A-TCTTTAATCGAACAACTCTCAGGGAATC-GGATGGACTGTTTAGAATG- 151305

Query:   1209 CTT-CTTCTTAAACTTGG 1193
              ||| ||| | ||  ||||
Sbjct: 151306 CTTGCTTTTGAATTTTGG 151323

 Score = 288 (49.3 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
 Identities = 154/246 (62%), Positives = 154/246 (62%), Strand = Minus / Plus

Query:    748 TCTGTT-ACGGACTTAAAAATTCATTTGGTCTGTGTTACCAAGTATCGTAAGTCTG-TAT 691
              |||||| || |||||||   | ||| | || |  |||   ||||| || |     | |||
Sbjct: 151743 TCTGTTTACAGACTTAACGCT-CATATCGTTTTAGTTGTGAAGTACCGCAGAAAAGCTAT 151801

Query:    690 TCACAAAGGAAAGTATTGAACTAATTGAAA-AAACGTTTAGAGAGGTAGC-TAATAAAAT 633
              | |   || ||| |  | |||   |||||| |||   | | |||  || | | | |||||
Sbjct: 151802 TAATGCAG-AAA-TCCTAAACAGGTTGAAAGAAATAATCACAGA--TACCCTTAAAAAAT 151857

Query:    632 GG-ATTTTCAAGTAATTGAATTTAACGGTGAAGACA-ACCATGTTCACGCGCTTATTGAA 575
              || ||| | || |  | || ||||||||||||  || | |||||||||    | ||||| 
Sbjct: 151858 GGGATTGTGAACTGTTAGAGTTTAACGGTGAAC-CAGATCATGTTCACATATTAATTGAC 151916

Query:    574 TATCCCCCCAAGTTATCCATCTCTCAA-ATTG-TTAATGCTTTAAAAGGTGTCTCTAGTC 517
              || |   |||  | | ||  || |||| |||| ||     | | |||   ||    ||| 
Sbjct: 151917 TA-CAAACCAGATAAACCG-CTATCAACATTGATTGGAAATATCAAAACAGTG---AGTA 151971

Query:    516 GCAGGT 511
              ||||||
Sbjct: 151972 GCAGGT 151977

 Score = 263 (45.5 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
 Identities = 109/160 (68%), Positives = 109/160 (68%), Strand = Minus / Plus

Query:   1227 GGCTGATTGTTTACTTGTCTTCTTCTTAAACTTGGGTGTGCCTACT---TTTTTGCCTTT 1171
              | ||| |||    | || |||||| |||||||||||   |||||||   |||||||||||
Sbjct: 267068 GACTGCTTGCAACCATG-CTTCTTTTTAAACTTGGGAAAGCCTACTCCTTTTTTGCCTTT 267126

Query:   1170 GCGTTTACCCTTGAGTGAATCAAAAAAGTTTTTGTAAGCAACTC-CTAAAT-CAGCAACA 1113
              |   ||  | || ||| |  |||||||||||||||| ||   || |||||| |   | | 
Sbjct: 267127 GACCTT--CTTTAAGTCAG-CAAAAAAGTTTTTGTATGCTG-TCTCTAAATTCTTGAGCG 267182

Query:   1112 GATTGTTGTAAAGGGATA-TTAGAAACATCAGATAACCAT 1074
               ||| | |||| || | | |||   || ||    ||||||
Sbjct: 267183 AATTCT-GTAA-GGCAAACTTATCTACTTCCTTCAACCAT 267220

 Score = 156 (29.5 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
 Identities = 62/90 (68%), Positives = 62/90 (68%), Strand = Minus / Plus

Query:  2085 AGAATTTTGACATACTCACC-GACCTAAAGGTGCGGTGATTCTTGACGCTTCACCG-GAC 2028
             ||  ||||||||||||| || ||  || |  |  || |||||| | | |   || | || 
Sbjct: 72616 AGGCTTTTGACATACTCCCCCGAA-TATAATTCGGGGGATTCTAGGCTCAA-ACAGCGA- 72672

Query:  2027 TGTGCTGGCGAA-CCAGTCTTACCTGTCCT 1999
             | |||||||| | ||||||| || |  |||
Sbjct: 72673 T-TGCTGGCGTAGCCAGTCTGACATCACCT 72701

 Score = 137 (26.6 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
 Identities = 77/124 (62%), Positives = 77/124 (62%), Strand = Minus / Plus

Query:  2519 TATAGCAGTCAGTTTTGGTTTTTGAATTGCCTTGCTTGGGA-TAAGA-ATAGAGGAAA-- 2464
             | | || |  ||  ||   |||| | |||| | |   |||| ||||| |||| ||| |  
Sbjct: 55114 TTTTGCTGCAAGGGTTTTATTTT-ATTTGCGTAGACAGGGAATAAGAGATAGGGGACAGC 55172

Query:  2463 AT-GCTTTTTG-AT--AGGTAAGGAGTTTATTCAAAAATCAAACTTTAGTCCTATAT-TT 2409
             |  |      | ||  |||||  ||  || |||||||||||||    | |||||||| ||
Sbjct: 55173 AGAGAAGCAGGGATTGAGGTACTGAAATTTTTCAAAAATCAAATAGGATTCCTATATATT 55232

Query:  2408 GACC 2405
              | |
Sbjct: 55233 CATC 55236

 Score = 131 (25.7 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
 Identities = 67/109 (61%), Positives = 67/109 (61%), Strand = Minus / Plus

Query:   1148 AAAAAGTTTTTGTAAGCA-ACTCCTAAATCAGCAACAGATTGTTGTA-AAGGGATATTAG 1091
              |||||||||||  | ||| | ||| || ||   |   || ||||||| || ||  |  ||
Sbjct: 151343 AAAAAGTTTTTAAACGCAGATTCCAAATTCTTGAGT-GACTGTTGTAGAACGGC-AGCAG 151400

Query:   1090 AAACATCAGATAACCATGAACGCTCAT-CAGTCTTTTTAGCTTGCGTAA 1043
                   ||    ||||||  |   |||  |||| | || | || | ||||
Sbjct: 151401 TTGGTTCTTGCAACCATTCATAATCAGACAGTTTCTTCAACTGG-GTAA 151448


>ntns01:11:cmr_contig_195 <http://www.tigr.org/tigr-scripts/CMR2/infxview?db=omnium&asmbl_id=195&startbp=1&stopbp=300000&width=1000&height=300> Nostoc sp. PCC 7120  Plasmid pCC7120 gamma Tue Jan 21
            19:52:55 2003
        Length = 101,965

  Minus Strand HSPs:

 Score = 255 (44.3 bits), Expect = 0.0029, P = 0.0029
 Identities = 185/321 (57%), Positives = 185/321 (57%), Strand = Minus / Plus

Query:   777 TGACAAGCCAGTTTCGCAGGGAAAGACACTCTGTTACGGACTTAAAAATTCATTTGGT-C 719
             ||| ||  |||||| | |  |     ||  |||||     | |  |  | ||  | || |
Sbjct: 78011 TGAAAACTCAGTTTAGAAAAGCGTCCCATGCTGTTTTTAGCATTCACTTACACGTTGTAC 78070

Query:   718 TGTGTTACCAAGTATCGTAAGTCTGT-ATTCACAAAGGAAAGTA-TTGAACTAATTGAAA 661
             | | || |||| ||||||||    || ||| ||| |||||| || |||   ||| | | |
Sbjct: 78071 T-TATTGCCAAATATCGTAAAGAAGTTATT-ACACAGGAAA-TACTTGT--TAAGTTACA 78125

Query:   660 AAACGTTTAGAGAGGTAGCTAATA-AAATGGATTTTCAAG-TAATTGAATTTAACGGTGA 603
             | | || |  |   ||   |   | ||| | |  | |  | | | ||| ||||  || ||
Sbjct: 78126 AGAAGTATTCAACCGTGTTTGCGAGAAACGTAAATGCTTGCTTACTGAGTTTAGTGGCGA 78185

Query:   602 AGACAACCATGTTCACGCGCTTATTGAA-T--ATCCCCCCAAGTTATCCATCTCTCAAAT 546
             |||||||||||| ||   | | || ||  |  ||||   |||   ||  || || ||  |
Sbjct: 78186 AGACAACCATGTGCATTTGTTGATAGACGTGCATCCTGACAACA-AT--ATTTCACAGCT 78242

Query:   545 TGTTAATGCTTTAAAAGGTGTCTCTAGTCGCAGGTATG-GACAAGCCGGATACAAGAAAC 487
               ||  | |  | |||   |  || |||||||  |||  || |||  |  | |||||   
Sbjct: 78243 AATTGGTTCACTCAAATCAGCATCAAGTCGCAT-TATTAGAAAAGA-GTTT-CAAGATTA 78299

Query:   486 CCCACAAAGAAGCCTTGTGGA 466
              | | ||| ||   |  ||||
Sbjct: 78300 TCTA-AAACAATATTATTGGA 78319


Parameters:
  B=20
  cpus=1
  E=10
  V=20
  filter=dust

  ctxfactor=2.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Strand MatID Matrix name     Lambda    K       H      Lambda    K       H
   +1      0   +5,-4           0.192   0.173   0.357    same    same    same
               Q=10,R=10       0.104   0.0151  0.0600    n/a     n/a     n/a
   -1      0   +5,-4           0.192   0.173   0.357    same    same    same
               Q=10,R=10       0.104   0.0151  0.0600    n/a     n/a     n/a

  Query
  Strand MatID  Length  Eff.Length     E     S  W   T   X   E2      S2
   +1      0     2700      2700       10.  171 11 n/a  73  0.024    82
                                                      103  0.023   124
   -1      0     2700      2700       10.  171 11 n/a  73  0.024    82
                                                      103  0.023   124


Statistics:

  Database:  /usr/local/db/CMR/nostoc_pcc_7120.1con
   Title:  /usr/local/db/prok/internal/nostoc_pcc_7120/annotation_dbs/nostoc_pcc_7120.1con
   Posted:  10:04:34 AM EDT Apr 14, 2003
   Created:  7:52:56 PM EST Jan 21, 2003
   Format:  XDF-1
   # of letters in database:  7,211,789
   # of sequences in database:  7
   # of database sequences satisfying E:  3
  No. of states in DFA:  256 (256 KB)
  Total size of DFA:  317 KB (320 KB)
  Time to generate neighborhood:  0.07u 0.00s 0.07t  Elapsed: 00:00:00
  No. of threads or processors used:  1
  Search cpu time:  0.46u 0.26s 0.72t  Elapsed: 00:00:01
  Total cpu time:  0.63u 0.27s 0.90t  Elapsed: 00:00:01
  Start:  Mon Jul  7 07:51:24 2003   End:  Mon Jul  7 07:51:25 2003



------------------------------------------------------------------------

| TIGR CMR <http://www.tigr.org/tigr-scripts/CMR2/CMRHomePage.spl> |
TIGR Home Page <http://www.tigr.org> |

Please report problems to cmr@tigr.org <mailto:cmr@tigr.org>